| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3157 |
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| Symbol | |
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| ID | 6205378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4107428 |
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| End bp | 4109662 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641692823 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001820037 |
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| Protein GI | 182414971 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.513945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.746059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGTC CGCTTGATCC CGTCCCGCCG CCGCCGGCAT TCGCGCGCAC GGATCGCCTG
GCCGCGGTGC TCGTGGTCGC GGCGACGTTG CTGGCGCATG CGCCGGGGCT GGGCGGCGGA
TTCATTTGGA ACGATGCCGA TTACGTGACG GCCCCGGCGC TGCGGTCGTG GGCGGGATTG
TGGAGAATCT GGACCGAGAT CGGCGTCACC GAGCAATACT ATCCAGTACT GCACAGCGCG
TTTTGGCTGC AGCACCAGCT CTGGGGCGAT CACGCGCTGG GTTATCATCT CCTCAACCTC
ATCGCCCACG CGGGCTGTGC GGTGATGTTC GGACTCGTGC TGCGTCGGTT GGCGATACCG
GGCGCGTGGA TAGCGGCGAC GCTGTTTGCG CTGCATCCCG TGCACGTCGA GTCGGTCGCG
TGGATCTCGG AGCAGAAAAA CACGCTGTCG CTGATGTGCT ATCTGGCCGC GGCGTGGAAG
TATCTGGAGT TTGACGAAAC CCGTCGCCGC GGTGCCTACG CGTGGGCGAG CGGCTGGTTC
GCCGTAGCGC TGCTGACCAA GACAGTGACC GCGACCTTGC CGGCGGCGCT GCTCGTCGTG
GCGTGGTGGC GGCGCGATAG GCTCGAGTGG CGACGCGACG TGCGCCCGCT GCTGCCATGG
CTGGTGACGG GAGCGGCGGT CGGCCTGGCG AGCGGATGGA TCGAGCGGCA CGTCGGAGGC
GCCGGTGGAG ATGAATTTGC TCTGACGTGG ATCGAGCGGG GGCTGATCGC CGGACGCGCG
TTCTGGTTTT ATCTCGGCAG CCTCGTATGG CCCTTCGAAC TCAATTTCAT TTATCCGCGT
TGGGTTCCCG ACGTGCGCGT GTGGTGGCAG TGGCTCTATC CACTCGCTGC CTTGGCGCTG
TTGGCGGGCT GCTGGGTGAC CCGACGGTGG AGTCGCGGGC CGCTCGCGAG CATCTTGTTT
TTCGCCGGCT CGCTGTTCCC GGCGCTCGGG TTCGTGAATC TCTACGGCGC ACGTTACTCG
TGGGTCTGGG ATCACTGGCA ATACCTGCCG GATCTCGCTC CGCTGGCGCT ACTGGGCGCG
GGCGGGGCGC TCATCGCGCA GCGTGGCGCG GGGCACTGGC GATTCACGGC GTGGAGCGTG
TTTGCGATGG TGGTCGCGTT GATGGCAACG CTTACCTGGC AGCACAGCCG AGTTTTTCGC
GACGACGAGA CGCTGTTCAC GGCGACACTG CGGCGAAACC CGGCAAGCTG GATGGCGGCG
GGGAATCTGG CGGCGCGGCT CGCGAGCGAT CCGGCGCGGC GGGCTGAGGC GATCGGCTAT
TTCGAAATGG CGCTGCGGCT GAAGCCCGAT GCGGCGGAAC TGCACGAGGG ACTCGGCTAT
CTGCTCGCCC GGGATTCGGC GACACAAGCG CCGGCGCTCG AGCATGCCGA GGCGGCGCTA
CGACTGGATT CGGCGCGTGC GTCGGCGCAC AACCTCCGAG GCATGCTGTT GGTGCGGGCA
GGAGAAATTG ACGCGGCGAT CGGAGCCTTT CAGCGCGCAC TGAAGTTGGA GCCTAAGCTC
GCCGCAGCGG CTGCGAATCT TGGCAGCGCG CTCCTTGCAG CCGGCCGGCC GGCCGAAGCG
GTGCCCGTGC TGGAACGCGC GGTTGAGTTC GCGCCGACGC TGGCAGCTGC ACATCTGGCG
CTCGGCGATG CACAGCGCGC ACTGGAGCGA ACGGCGGACG CGGAGCGGAG CTACCGGGAG
GCGTTGCGAC TCGAACCCGC GGCGCTCGAT GGGCGACTGC GGCTGGCGGA GTTGCTGGCG
GAGCAGGGCC GCGACGCCGA GGCGGCGCCG CTGCTGCGCG AGGTGCTCGC GCGCGACGCG
GGCTCGGCCG ACGCGCACTA TCAAATCGGA CGGTTGGGAC TGCGCGCCGG CGATACCGCG
ATGGGGGTTC ACGCATTGCG GGAAGCCGTG CGGCTGCGGC CGGACTGGCC GGCGGCGCGA
CTCACCTTGG GAAACGCGCT GGCGCGAGCT GGCGACATGA CGGGCGCGGT GGAGGAGTTT
CGCGCGGCGT TGGCGTTGCG GCCGAACGAT CTCGGCGCGC GCAACAACCT GGCAAACGCG
TTGCTCGCCA GCGGCCGGGT GGCGGAAGCG ATTCGTGAGT ACGAAACGGC GCTGCAGCAG
CAGCCGGACA ACGCGGATAT CCGCCGAAAC CTGGCGTTCG CCCGCGAGCT TTTGGAACGG
GGCACGGGAA ACTAA
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| Protein sequence | MNRPLDPVPP PPAFARTDRL AAVLVVAATL LAHAPGLGGG FIWNDADYVT APALRSWAGL
WRIWTEIGVT EQYYPVLHSA FWLQHQLWGD HALGYHLLNL IAHAGCAVMF GLVLRRLAIP
GAWIAATLFA LHPVHVESVA WISEQKNTLS LMCYLAAAWK YLEFDETRRR GAYAWASGWF
AVALLTKTVT ATLPAALLVV AWWRRDRLEW RRDVRPLLPW LVTGAAVGLA SGWIERHVGG
AGGDEFALTW IERGLIAGRA FWFYLGSLVW PFELNFIYPR WVPDVRVWWQ WLYPLAALAL
LAGCWVTRRW SRGPLASILF FAGSLFPALG FVNLYGARYS WVWDHWQYLP DLAPLALLGA
GGALIAQRGA GHWRFTAWSV FAMVVALMAT LTWQHSRVFR DDETLFTATL RRNPASWMAA
GNLAARLASD PARRAEAIGY FEMALRLKPD AAELHEGLGY LLARDSATQA PALEHAEAAL
RLDSARASAH NLRGMLLVRA GEIDAAIGAF QRALKLEPKL AAAAANLGSA LLAAGRPAEA
VPVLERAVEF APTLAAAHLA LGDAQRALER TADAERSYRE ALRLEPAALD GRLRLAELLA
EQGRDAEAAP LLREVLARDA GSADAHYQIG RLGLRAGDTA MGVHALREAV RLRPDWPAAR
LTLGNALARA GDMTGAVEEF RAALALRPND LGARNNLANA LLASGRVAEA IREYETALQQ
QPDNADIRRN LAFARELLER GTGN
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