| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3118 |
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| Symbol | |
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| ID | 6204303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4058909 |
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| End bp | 4061365 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641692784 |
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| Product | Alpha-L-arabinofuranosidase-like protein |
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| Protein accession | YP_001819998 |
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| Protein GI | 182414932 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.222033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0458046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACACC CCCGACTCCC CCTGCTCACG TTGGCGCTGC TCACGCTGAC GTTCCTGTTC
CGTGCCTCGG CGCACGCGCA ATCTGACATC CCTGTTTACG ACGATGCTCT CGGTTCCGGC
TGGCAAAACT GGAGCTGGGC AACCGTGAAT CTCTCGAGCA CCACGCTCGT TCACGGCGGT
TCGACTGCGA TCGCCGTCGA TGCGAGCCCA TGGTCCGCGC TGAGTCTGCG CCACGACCCG
CTCGACACCA CCGGCTACGG CAAGCTGACG TTCTGGATCA ACGGCGGGCC CACGGGCGGG
CAGACGCTGC GCGTCTCGGC CACGCTCAAC GACGCCGGCC AGCCGGCGGT CGTGATTGGC
CCGCTGGCGG TCAACACCTG GCAGCTCATC GAAATCCCGC TCGTCTCGCT GGGCGCCGAC
GATCGGACCG ACTTTACCGG CTTCTGGATT CAGGAAGGCA CCGGCAACAC CGCACCCACG
TTCTACGTCG ACGACATCGT GCTGAAAGGC AGCGTGCCCA CGGTGCCGCC CCCACCGCTC
GTCGGCATGG CACTCTACGA AGACGCGTTC GTCAACGGCT GGCAGAACTG GAGCTGGGCC
AACGTCAACG CCGCCGCGAC GAATCCAGTG AATTCCGGCG CCAGTTCGAT CGCGGTCACC
TCGGACCCAT TCACCGCGGT TTACTTTCAC CACACCGCGA TGCCGACGGA CAGCTACGAC
AGCCTCACCT TCTGGATTCA CGGCGGCAGT GAGGGCGGAC AGGTCATCAA GGTTTCGGCA
CTCTTGAGTG ATACGGCCCA GCCGGGCATC ACGCTGCCGC CGCTGACGGC GAACACGTGG
CAGAAGATCA CGCTCTCGCT GGCCGATCTT GGCGTCGCCG AGCGGCCCGA CCTCACGGGC
ATCTGGTTCC AGGAAAACGC CGGCGTCGCG CAGCCGACCT ACTATCTCGA CGACGTGCGG
CTGAATCTTG CTCCGCCGCC CGCGGTGGTG CACGCGACCG TCGACGCGCG ACACATCCTG
CAAAAAGTCG ATCCTCGGCT CTTCGGCCTG AACACCGCGA TCTGGGACGG CGCCTTCGAC
ACGGCCACCA CGGCCGAACT GCTCGTCGAG GCCGACAACC AGGCGCTCCG TTTCCCCGGC
GGCTCGATTT CCGATATTTA TCACTGGGAA ACCAACACCA ACGACGGTGA GACGTGGCAG
TGGGCGACCA GCTTCGACGA GTTCGCCCAT ATCGCCACGC TCACGAAAGC GCAGGTTTAC
ATCACGGTGA ATTACGGCAC CGGCACGCCG GAAGAGGCCG CCGCGTGGGT GCGGTATGCG
AACCGGACGA AGGACTACGA CTTCAAGTAT TGGGAAGTCG GGAATGAGAA CTACGGCACG
TGGGAAGCCG ATCGCAACGA TCGGCCGCAC GATCCCGTGA CCTACGCCCA CCGCTTCAAG
GACTACTACC GGCAGATGAA GACGGTGGAT CGCACGATCA AGGTCGGCGC CGTCATCACC
GCGACGGAGG ACACCGAGGT GAACTATCCC GATCTCTCCG TGACCAACCC GCGTACCGGC
GCTGCGCACA GCGGGTGGAC TCCCGTGTTG CTCGCGACGT TGAAGCAACT TGGCGTGATC
CCGGACTTCG TCGTTTACCA TCGCTACGAG CAGGCGCCCG GCGGTGAGAA CGATGCCTTC
CTGCTCACGT CTGCCCGCAC CTGGCCCGAC GATGCGGCGC GGATTCGGCA GATCCTGAAC
GACTATCTCG GACGCGATGC GCGGCGCGTC GAAATCAACT GCACGGAGAA CAACTCCGTC
TACAGCAATC CCGGCAAACA GACGACCAGC TTGGTGAACG GACTCTTCCT CGCGGACAGT
TTCGGCAACA TCATGAAGAC GGAATTCCGC GCTTTCTTCT GGTGGGATCT GCGCAACGGC
CAGGAAGCCG GCAACAACAA CAGCGCATCG CTCTACGGCT GGCGCCGCTA CGGCGACTAC
GGAGTCGTGA CCGCCGCGGA TCCCGCGGGC CCGGCCGATC GCTACCCGAC CTACTACGTC
TACAAGCTGC TGCAGCACTT TGCCCGCGGT GGCGAATCCG TGGTCGAGGC TACGAGCGAC
TACAACGGGC TCGGCCTCTA CGCCGTCCGC GAGCACAACC GCGCCCTGCG CTTGCTCATC
ATCAACAAGC ACCCGACGGA GACGCTGAAC GCGAGCATCG CGATCGACGG CTTCAAGGTC
GATCCGCAGG CGAAGGCTTA CAGCTATGGC ATCCCGCAGG ATGAAGCGGC CCGCACCGGC
ACCGGCTCGG CGGATGTCGC GGAAACAAAC CTCACGCTCG CCGGCAACAC GTTCACCTTC
TCGCCCGCGC CGTACTCGGT CACCGTGATC CAACTCGACA AAGGCAATCG CGGTCACCAT
GGCGACCACG ACCACGACCA CGACGACGAT GACGATGGCG ACGATGGCGG CGATTGA
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| Protein sequence | MRHPRLPLLT LALLTLTFLF RASAHAQSDI PVYDDALGSG WQNWSWATVN LSSTTLVHGG
STAIAVDASP WSALSLRHDP LDTTGYGKLT FWINGGPTGG QTLRVSATLN DAGQPAVVIG
PLAVNTWQLI EIPLVSLGAD DRTDFTGFWI QEGTGNTAPT FYVDDIVLKG SVPTVPPPPL
VGMALYEDAF VNGWQNWSWA NVNAAATNPV NSGASSIAVT SDPFTAVYFH HTAMPTDSYD
SLTFWIHGGS EGGQVIKVSA LLSDTAQPGI TLPPLTANTW QKITLSLADL GVAERPDLTG
IWFQENAGVA QPTYYLDDVR LNLAPPPAVV HATVDARHIL QKVDPRLFGL NTAIWDGAFD
TATTAELLVE ADNQALRFPG GSISDIYHWE TNTNDGETWQ WATSFDEFAH IATLTKAQVY
ITVNYGTGTP EEAAAWVRYA NRTKDYDFKY WEVGNENYGT WEADRNDRPH DPVTYAHRFK
DYYRQMKTVD RTIKVGAVIT ATEDTEVNYP DLSVTNPRTG AAHSGWTPVL LATLKQLGVI
PDFVVYHRYE QAPGGENDAF LLTSARTWPD DAARIRQILN DYLGRDARRV EINCTENNSV
YSNPGKQTTS LVNGLFLADS FGNIMKTEFR AFFWWDLRNG QEAGNNNSAS LYGWRRYGDY
GVVTAADPAG PADRYPTYYV YKLLQHFARG GESVVEATSD YNGLGLYAVR EHNRALRLLI
INKHPTETLN ASIAIDGFKV DPQAKAYSYG IPQDEAARTG TGSADVAETN LTLAGNTFTF
SPAPYSVTVI QLDKGNRGHH GDHDHDHDDD DDGDDGGD
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