Gene Oter_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3110 
Symbol 
ID6208826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp4045639 
End bp4048425 
Gene Length2787 bp 
Protein Length928 aa 
Translation table11 
GC content63% 
IMG OID641692775 
Producthypothetical protein 
Protein accessionYP_001819990 
Protein GI182414924 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0237915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCA CGAAAGCGAA GCTGATCCAA CTCCGACACT TCATCCCCAT GAAATCATCC 
AGCATTTTGT GCTCCGTTGT AGCCGCTCTC CTGGGCAGCA CGGCGATGGC GGCGGCACCG
TCGCCTGGTA CCGCCGATGT GGTCTTCTCC GAGTCGTATC AGGAACCAGG TGATAACCGG
AACTGGAGGG AAGGGATGGT GACCGGGAAT GGCATCGACG GCGTCGTCAG CTCCGGGTCT
CCTTACGCGG ACACATTCAT CTTCCAGAAC ATGTTTTTCG CGCTTCCGTC GGCTGATCCA
CGGGAGAACC CGGACTTCCT GCGCGCGGAA CTGGCTCCGA CGCTCGATCA CGTTTTCAGA
AACGACGACA GCTGGAAACT GAACAGCCGG AAACGAACCT TCTTCTATTG TTTTCACCCT
GCCCATCTTC TCCGCATCGG CCAACAGGAA CGCGCGACGC GCAGCTACCG CCGCTGGACC
AACCTCGCCA CTGCCGAGAT CGGCGTCGCT TACTCGGATT CGGAGGGCGA TTGGGAACGC
CGGACCTTCG CGTCACGATC GGACGGCGTG ATCGTGACCG AACTGCGGCA GTCGTCGAAA
GGCGCCAAGC TCAACCTCAC GCTGTCGATC GACGATCTGG CTTCATTACC GAAATTTGGG
AAACGCGATG AAGCGCGGCT TCAGTATAAG AAGAGCGTCG CCGACGACGG TTCCTACCTT
GCGCTGGTGG CGCACTATCC GTCGTACGAT GGCAGCGAGC TCAAGGATGC CGGTTATGCG
GGTCTGACCC GCGTGGTCGC GGTCGGCGGC CGTGTCGAGA GAGTCACGGT GCCTGGAGAA
AGAGAGGCTC AGAACGTCGG CGGCGAGCCC AACCCAGCCC TGCGCATCTC GGACGCTGAC
GCCGTTTATC TCATCACCAA GAGCGATCGC GACACGGCGA TGGGCCCGCT CTCCGCGTTT
CAAGCGGCAT CGGAATACGC ACTCGTGAAC CGACTCGCCA GCGCGACCGA AGCCGTGGCG
AAAAAGTACC AGCGCGGCGA TACGTTCGAC TACGCTGCGG CCCTGGCCGC ACATGTGGAG
TTGCACGGAG CGGAATATTC CCGGGTAAAG CTGGATCTGC GCGCCGACGC GAGCGATCGC
GCGCTGGCCA ACGAAGCGCT TCACGCGAAG CAGAAGCAGC AGAACGCGAC GCTCAACCTC
GCGTTTCTCG AACGCGCCTA CCGCATGGGC CGCTACGTGG AGATTTGCTG CTCCGGGGCG
GCCACGCCGC GGCTGTGCGG ACTGTGGACG GGCGAGTGGA ATCCGGGATG GCGCGGCATC
TACACCATGG ATGCCAACGT CAATCTGCAG GTCGCCCCGA TGAACACGGG CAATCTTTCC
TCCGCGCCCG TCGGCTACAT CAATTTCGTC CTCCGACAGG TGGACGACTG GCGCAAGAAC
GCCGCCGACG TCTACGGAAT GCACGACGCG CTGCAGGTCC CGGTTAATAC CGACGGCGAT
CGCGCCATGA TGGTCGAGAC CGACATCGAC TATCCCTTCC AATACTGGAA CGCGGGCGCC
AGTTGGATGC TGCTGCCGAT CTTCGAGTAC TGGCAATGCC GCGGAAATCA GCGCATTCCC
CTCAGCGACC GCGTCGACCT GATGCGGATT CGCCAGGCGC TCGGCGTCGC GGACGGCGGA
CTCTCCGAAG CGGAGGCCCA GGCGCTGGCC GCACGAGGGT GGCTCGACTT GGAAAAAGAC
ATCCTGCTGC CGCTCCTCAC CAAGCAGGCG AATTTCTGGG AACAGTTCTG CAATCCCGAA
TACTTCGTCG ATGCCGCCGG ACGACGCCAG CACCAGCCTG GCAAACGCGC GCTGGAGGCG
GGTGAGCGGT TCCTCCTCAT CCCCACGTAT TCGCCCGAAA ACTCGCCCCG CGGCTACCGG
AGCACGCTCA CGGTCAACGC CACCATGGAT ATTTCCGCCG CGCGTGATGG GCTCGATATG
ACGATCGCCG TGGAACGGGC CGTCAATCGC CCCGAAAGTG CGGCCGCCAT TTCGCGATGG
ACCAAGCTCC GCGACAGCCT TCCCGCGTAC GAATACGACG GCCAGCCCGG TGAACTCACT
GAATCCGGCG GCGGCGGCGC GTTGCGCGAG TGGGCCACGC AAGACTACGT GGAAAACAAC
AACCACCGGC ACAGCAGTCA TCTCTACCTC GCCTGGCCGG GGTATGAAGC AGGGCTCGAT
CCGAAAATCC GCGCCGCCGC CCTCCAAGCG GTCGCCAACC GTGATCGCCT CAACACGCGC
GACAACACCA CGGGCCATGG CTGGATCCAT CGCGCACTCA TCTCGGTGCG CCTGGGCAAC
GCCCCGGACG TTCAGTCGTG TCTCCTGCAA CTGCTCGCGA GCGACATTTA TTACACGTCG
TTGGTGACGG ATCATAACAC CAACCGAAAG TCCGACACCT ATTGCACCGA CGCGTCCATC
GGGCTGGTCG CCACGGTTAA CGAGTCCCTG GTTTTCTCGA CCACGGGCGT CATCGAACTG
CTGCCCGCTC TTCCTCCGGG TCTGCGCGCC GGATCCATTC AGCGCCTGCT GGCACGTTCT
CGCGCGGAGA TCGAGCACTT GGAATGGAGC CCGGGACAAG TCATGGCTCG AATTCGTTCG
GACGTCGACC AGGCGCTGGT GATCAAATGC GGCCAGCCGT GGAGAACGGT CCACGTCGAA
GGGGGGAGCC CGTCGCGGAG CATTCCCGGC GAGAGGGTTG AGCTCACGCT GAAAACCGGC
GACATCGTTA CGCTTCGCTT CGAGTGA
 
Protein sequence
MDATKAKLIQ LRHFIPMKSS SILCSVVAAL LGSTAMAAAP SPGTADVVFS ESYQEPGDNR 
NWREGMVTGN GIDGVVSSGS PYADTFIFQN MFFALPSADP RENPDFLRAE LAPTLDHVFR
NDDSWKLNSR KRTFFYCFHP AHLLRIGQQE RATRSYRRWT NLATAEIGVA YSDSEGDWER
RTFASRSDGV IVTELRQSSK GAKLNLTLSI DDLASLPKFG KRDEARLQYK KSVADDGSYL
ALVAHYPSYD GSELKDAGYA GLTRVVAVGG RVERVTVPGE REAQNVGGEP NPALRISDAD
AVYLITKSDR DTAMGPLSAF QAASEYALVN RLASATEAVA KKYQRGDTFD YAAALAAHVE
LHGAEYSRVK LDLRADASDR ALANEALHAK QKQQNATLNL AFLERAYRMG RYVEICCSGA
ATPRLCGLWT GEWNPGWRGI YTMDANVNLQ VAPMNTGNLS SAPVGYINFV LRQVDDWRKN
AADVYGMHDA LQVPVNTDGD RAMMVETDID YPFQYWNAGA SWMLLPIFEY WQCRGNQRIP
LSDRVDLMRI RQALGVADGG LSEAEAQALA ARGWLDLEKD ILLPLLTKQA NFWEQFCNPE
YFVDAAGRRQ HQPGKRALEA GERFLLIPTY SPENSPRGYR STLTVNATMD ISAARDGLDM
TIAVERAVNR PESAAAISRW TKLRDSLPAY EYDGQPGELT ESGGGGALRE WATQDYVENN
NHRHSSHLYL AWPGYEAGLD PKIRAAALQA VANRDRLNTR DNTTGHGWIH RALISVRLGN
APDVQSCLLQ LLASDIYYTS LVTDHNTNRK SDTYCTDASI GLVATVNESL VFSTTGVIEL
LPALPPGLRA GSIQRLLARS RAEIEHLEWS PGQVMARIRS DVDQALVIKC GQPWRTVHVE
GGSPSRSIPG ERVELTLKTG DIVTLRFE