| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3074 |
|---|
| Symbol | |
|---|
| ID | 6208047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4001278 |
|---|
| End bp | 4001880 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641692739 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001819954 |
|---|
| Protein GI | 182414888 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.310248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0100443 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTG TTGACGCCCC GGCCCGGACG CACCCCGGCT TCGCGAGCCC CGTCGCGGGC
GGCTCACGAC CGGCCGCGTC GCCTCGCCCG TCGGAGCTGC GCGATCTCAT GGCCGCGGCC
AACGCCGCGG CCACGATTCC CGCGGACCAG GACTATGCGA TCTGGGAAGA CGTCTGCCGG
AGACTCGCGG CAGAAAAGAA ACCCGCGCCC GTGCGGCCTG CCCCGGGGCC CGGACCCCGC
ACCGTGCTCG TGGCCGATGA AGCGCCGGCC CTTCGCGAAA CCATGCGCAA GACACTCGCC
GCCGCCGGCT ACGAGGTGGT CTGCGTCGAG GATGCCGCCA AACTTTTGTT GGTCGCGCCG
CAACGAAAAG CCGACCTGAT CATCCTCGCG ATGGTTCTGG CGGGAAGCGA TGGCGCCGGC
CTGATTGCCC AACTCCGTGA GCTGGCCATG CATCGCTGCA CGCCGATCAT GATGCTCACC
GCCCCTGGCC AGGACGGAAA AAAGATTGCC GCCCGCCGCG CCGGCGCGAG TGGCTGGATC
GCCAAACCTT TCGACCCCGC CCGCTTCGTG GCGATCATTC AACAGGTGTG CCCCGGTTGC
TGA
|
|---|
| Protein sequence | MELVDAPART HPGFASPVAG GSRPAASPRP SELRDLMAAA NAAATIPADQ DYAIWEDVCR
RLAAEKKPAP VRPAPGPGPR TVLVADEAPA LRETMRKTLA AAGYEVVCVE DAAKLLLVAP
QRKADLIILA MVLAGSDGAG LIAQLRELAM HRCTPIMMLT APGQDGKKIA ARRAGASGWI
AKPFDPARFV AIIQQVCPGC
|
|---|
| |