| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3021 |
|---|
| Symbol | |
|---|
| ID | 6204378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3878874 |
|---|
| End bp | 3879830 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641692685 |
|---|
| Product | segregation and condensation protein B |
|---|
| Protein accession | YP_001819901 |
|---|
| Protein GI | 182414835 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.506353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.90269 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCA ACCTGAAAAA AGTGCTCAAG GCACTGCTCT TCTCGTCGAG TCACCCGCTC
GCGATCAAGG ACATCCAAGC CGCCTTCACC CGGTTTCACG ACACGGCGGC GCTCGAGCAC
GCGGCGGCGA GCGAGGAATC GACCGAGCCG GGCGAGTCGC CATCGCCGGC GGTGGAGGCT
GAAACGCCGA AGGCGGAAGC GGAGCCGGCA GCCGGGACCG AGGGCAACGG CGAGGCGCCG
GCCGCGGGCG AACCGGCCGA AGTGTTTGCG GAGACGCCGG CTGATCCGGA GCTCTACGCC
GAAGTGCCCT CGCTGATCAC GGCCACGCAG ATTCGCGAGG CGATGGACCA GATCGCGGCC
GAGTTGAAGG CGGCGGACGA AGGCTTGTTG CTGATCGAGG GCAGCACCGG TTACCGGCTC
GTCACGCATC CGCGGTTTGC GCGCTGGGTG CGGATCCTGC GTTCGGAACC GCCGCCGGTG
AAATTGAGCC AGTCCTCCAT CGAGACGCTG GCGATTGTGG CGTATCGCCA ACCCGTCACG
CGCGGCGAGA TCGAGACCAT TCGCGGCGTG TCGGCGGAGG CCGGCGTCAA CAAGCTGCTC
GAGCGCGAAC TGATCTACAT CGTTGGTCGC GCCGACCTGC CGGGCCGGCC GATCCAATAT
GGCACCACGG ACAAGTTCCT CGAGTTTGTC GGCGTGAAGT CGCTCGACGA ACTGCCGGCG
TCCGACGTGC TGTCGTCGCG GCAGATCGAC GAGTGGCTCA AGACCGCGAT GAATCCTCCC
TCGCTGGGCG ACACGGACAT GGGACTGGCG AATGAGGAAC TGCCGCTCGA AGGGGCAGCC
GCCGGCGAAC CGGCCGCGGA GAGTGCAGGC GAGACCACGG CGAACGCCGA TGAGCCGGCC
GCGAGCGCAC CGGCTGCGCC GTCGGAATCC AGCGAAGAAA AACCGAACCC CGCCTGA
|
|---|
| Protein sequence | MAFNLKKVLK ALLFSSSHPL AIKDIQAAFT RFHDTAALEH AAASEESTEP GESPSPAVEA
ETPKAEAEPA AGTEGNGEAP AAGEPAEVFA ETPADPELYA EVPSLITATQ IREAMDQIAA
ELKAADEGLL LIEGSTGYRL VTHPRFARWV RILRSEPPPV KLSQSSIETL AIVAYRQPVT
RGEIETIRGV SAEAGVNKLL ERELIYIVGR ADLPGRPIQY GTTDKFLEFV GVKSLDELPA
SDVLSSRQID EWLKTAMNPP SLGDTDMGLA NEELPLEGAA AGEPAAESAG ETTANADEPA
ASAPAAPSES SEEKPNPA
|
|---|
| |