| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2963 |
|---|
| Symbol | |
|---|
| ID | 6205657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3808074 |
|---|
| End bp | 3808970 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641692628 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001819844 |
|---|
| Protein GI | 182414778 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.955909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTC GAATGCGCAT TCTTTGCTGT TTCTTCGCGC TCGGGCTGAT GGCCGGCCCG
GCCAGTGCCT TTGCGGCGAC GCCGACCGAC GGTGTGGCCC CGATGAAATC CGAGTGGTTC
ACCGCCAGCG AGGTCGCGCC CGCTACGTGG CGGATCGTCG ACCATGGCAC GGTAAACGTT
TACCTCGTGA TCGGTCGCGA TCGCGCGCTG CTGATCGACA CCGGCTACGG CCAGGCGAAT
CTTCGCCAGT ATGTGCAGTC GCTCACGTCG CTGCCGCTGA CGGTGATCAA CACGCACGGG
CATCTCGACC ATAGCGGCGC CGACCTGCAG TTCGGCACGG TGCTGGCGGA TCCCGCGGAC
TTCGCCGGCA TCGAGCGCAC GGCCGACTCG GTTCGACGTG AGAGCAAACC GGATCCCAAG
CTGCCGGCCG CGGAGCGGTT CGATTATGGC GCCAACGCCA GGCCGCTCGC ATTGAAGCCC
GTCAAGGACG GCGAGATCAT CGACCTCGGC GGGCGTCAGC TCGAAGTCAT CACCACGCCC
GGACACACCC CGGGGGAAAT CGTGCTGCTC GATCGCGCGC AGAAACTGCT CTTTGCTGGT
GACCACATCA ACCGGCTCGT CTGGCTACAG CTCCGCAATT GTCTGCCGCT CGAAGCTTAC
CTGGCGAGTT TGGAGAAAAT CGCCGCGCGC GCCGATGAGT TCACCACGAT CATGCCCGGC
CACAACGAGC CGTTCGACCG GGGCGTGCTC GCAGAGAAGA TCACCTGCGT GAAAGGCATC
CTTGCAGGCA CGATCGCCGA CGAGGCTTAT CCGCACGCTT TCGCCTCGGG CCGCGTCGCG
AAGTTCGAGC GTTCGTCCGT CGTCTTCGAT CCGCAGAACC TTCAGGCCAG GCAATAG
|
|---|
| Protein sequence | MDFRMRILCC FFALGLMAGP ASAFAATPTD GVAPMKSEWF TASEVAPATW RIVDHGTVNV
YLVIGRDRAL LIDTGYGQAN LRQYVQSLTS LPLTVINTHG HLDHSGADLQ FGTVLADPAD
FAGIERTADS VRRESKPDPK LPAAERFDYG ANARPLALKP VKDGEIIDLG GRQLEVITTP
GHTPGEIVLL DRAQKLLFAG DHINRLVWLQ LRNCLPLEAY LASLEKIAAR ADEFTTIMPG
HNEPFDRGVL AEKITCVKGI LAGTIADEAY PHAFASGRVA KFERSSVVFD PQNLQARQ
|
|---|
| |