| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2961 |
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| Symbol | |
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| ID | 6204622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3806903 |
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| End bp | 3807181 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641692626 |
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| Product | phosphotransferase system, phosphocarrier protein HPr |
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| Protein accession | YP_001819842 |
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| Protein GI | 182414776 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.375656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATCGA CCCGGGTCGT CGTGCTTTGG CGCGGAGGGC TGCATCTTCG GCCCGCCACC
ACGCTCGTCC GCACCGCGAA GCGCTACAGC TCTTTGGTGT GGCTGCGTTG TGGCGGACGG
ATCGCGGATT TGCGCAGCAT TCTGAGCGTG CTCGCGTTGT GCGCGTCGAT GGGATCGGTC
GTGGAGATCG ACGTGGACGG CCCGGACGAG GGAGACGCCC TCCAGGCGAT CGAGGCTGTC
TTCGCGAGCA ACGCCGACCG GCAGAGTCAA TCGGACTAG
|
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| Protein sequence | MKSTRVVVLW RGGLHLRPAT TLVRTAKRYS SLVWLRCGGR IADLRSILSV LALCASMGSV
VEIDVDGPDE GDALQAIEAV FASNADRQSQ SD
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