| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2959 |
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| Symbol | |
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| ID | 6204397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3804386 |
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| End bp | 3806101 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641692624 |
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| Product | glycoside hydrolase family 42 protein |
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| Protein accession | YP_001819840 |
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| Protein GI | 182414774 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.556866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTGT CCAAACTCCC GATTCCCGTC ACGCCCAGCG GTTCATTTGC GCCGGGCCGC
GCGCGATGCC GTTGGCTCCC ACGTTGGGGT GCGTTCAAAG GGATCGCACT CGCCGGACTC
GTGCTCGCGA GTGTCGGCGT GGTCGCCGCG GCGCAGAACG TGATTCCGCG TCTGGAAAAA
CGCGGCGAGG TTACGCAGCT CGTCGTGGAC GGCGCGCCGT TCCTGATCCT TGGCGGCGAG
CTGCTCAACA ACTCGGCCAC GAGTCTCGAT TACCTCGCGC CGATCTGGCC CCGGCTGCGG
GAAACGCATC TCAACACCGC GCTCGTGGCG GTCTCGTGGG CTCAGCTTGA GCCGCAGGAG
GGCACGTTTG ATTTTTCCCT GGTCGATGGC GTGATCCAGC AGGCCCGGGC GCACGACATG
CGGCTCGTTC TGCTCTGGTT CGGCAGCTGG AAAAATACGT GGTCCAGCTA CGCGCCCGAC
TGGGTGAAGC GGGATTTCGA ACGCTTTCCA CGCGTCCAGC TGCGCAATGG CTCCGGCACC
GAGCGGCTCA CGCCGCTCAG CGAAGCCAGC CAACAGGCCG ACGCGCGCGC GTTCGCGGCG
TTCATGCGTC GCGTGAAGCA GCTCGATGCC GAACGGCACA CGGTGCTGAT GGTACAGGTG
GAAAACGAAG TCGGCGTGAT TCCCGATGCC CGCGACCATT CTCCGGTGGC CAATACCGCT
TATGCTGCGG CGGTGCCGGA CGCGTTGATG AGCTATCTGG CCGGCCATCG TGAGACGCTC
GCCCCGGAGC TGCGGGCCAA GTGGCTGGCG GCGGGTTTCA AAACGAGCGG CAGTTGGGAG
GAGGTGTTCG GACCGGGTTT GGAAACCGAG GATCTTTTCA TGGCGTGGCA CTACGCCCGC
TACATCGGCA AAGTGGCGGA AGCCGGCAAA GCCGAGTATC CGCTGCCGAT GTTCACCAAC
GCCGCACTGA TTCGGCCCAG CTACGCGCCG GGCCAATACA ACAGCGGCGG GCCGCTGCCG
CATTCGCTCG ACCTCTGGCG GGCGGGCGGG CCGCAGCTGG ATTTCCTGGC GCCGGACATC
TACTTCGAAT TCAAAACGTG GGCCGACAAA TTCAGTCGCA GCGGCAATCC GCTGTTCATC
CCAGAAACGC ATGGCGGGGC CGTCGGCGCG GCGAATGTCT TTTATGCGAT CGGCGCGTGC
GCGGCGATCG GGTTTTGTCC CTTTGGCATT GATCGCGGGC CTGGGCCGGA TCTCGAGCTA
GCCAAAAGCT ACAGCGTGAT CGCGCAACTC GCGCCGCTGA TTTTGGCGCA TCAGCCCGAG
GGCCGGGTCG CCGGTGTCGT GCTCGGCGAG CTCACGCCGT CGCAACAAAT TCAGCTCGGC
GACTACACGC TCGCCGTCGG CCGGAGCAAT CCGCGTGCGG TGCCGGCGGG AACGCCACCG
CCGGACGCAG ATCCGGTGGA TCCGCGGGGC CTGTTCATCG CGACAGGTCT GGACGAATTC
TACCTCGCGG GCGGCGGGCT CACGATCACC TTTATGCCGA AGAAGCCCGG TCCGCCGCTT
GTGGGCCTCG CCACGGTCGA AGAGGGGAAG TTTGTCGACG GCCGGTGGGT GCCGGGTCGG
CGGCTCGCAG GGGATGATAC AGGCCAAGGG AACAGCATCT CGCTGCGTGG CCTCGATCGC
GGTATTCAGC GCGTCACCGT CTACCGCTAT CGCTAA
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| Protein sequence | MTLSKLPIPV TPSGSFAPGR ARCRWLPRWG AFKGIALAGL VLASVGVVAA AQNVIPRLEK
RGEVTQLVVD GAPFLILGGE LLNNSATSLD YLAPIWPRLR ETHLNTALVA VSWAQLEPQE
GTFDFSLVDG VIQQARAHDM RLVLLWFGSW KNTWSSYAPD WVKRDFERFP RVQLRNGSGT
ERLTPLSEAS QQADARAFAA FMRRVKQLDA ERHTVLMVQV ENEVGVIPDA RDHSPVANTA
YAAAVPDALM SYLAGHRETL APELRAKWLA AGFKTSGSWE EVFGPGLETE DLFMAWHYAR
YIGKVAEAGK AEYPLPMFTN AALIRPSYAP GQYNSGGPLP HSLDLWRAGG PQLDFLAPDI
YFEFKTWADK FSRSGNPLFI PETHGGAVGA ANVFYAIGAC AAIGFCPFGI DRGPGPDLEL
AKSYSVIAQL APLILAHQPE GRVAGVVLGE LTPSQQIQLG DYTLAVGRSN PRAVPAGTPP
PDADPVDPRG LFIATGLDEF YLAGGGLTIT FMPKKPGPPL VGLATVEEGK FVDGRWVPGR
RLAGDDTGQG NSISLRGLDR GIQRVTVYRY R
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