| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2904 |
|---|
| Symbol | |
|---|
| ID | 6204426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3712223 |
|---|
| End bp | 3713077 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641692569 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001819785 |
|---|
| Protein GI | 182414719 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.419004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTG AACTTGATTT CGCGCTACCG ACAGACGGCG TGGTCGAGAT ACGCTGTCGA
AAAGGCCCGA TGCTCGCGCG GTACGTGTAC CTGCCGAACA CTCCGCTGGC TGAATCGCCG
CGGCCATACT TCCATCCGCT GTGCTCGATG GCGGGCGAAG AGCTGACCTG CTTTCGGCCG
AATGACCATC CGTGGCATCA TGGACTGAGC TTCACGATCA ACCAGGTTTC GGGGCACGCG
TTCTGGGGCG GGCCGACTTA TCGCCAGCCG GACGGCTATC AGTGGCGGAC AGATCATGGG
CGGCAGTGGC ACGTTGAGTG GCACAAACGT TGCGCCGAGC AGCTGGCGCA TACGATCGAA
TGGCAGACGG GCGCGCGGGA GACGCTCTTG CGCGAACAGC GGGTGCTGTC GTTCAAGGTG
CTCGGTCCCG CGGCGTGGCA GCTGCGATGG CAGGCGGAGT TGGTCAACGT CACCAGCCGC
GCGCTCGAAC TCGGTAATCC CTTTTCCTCC GAAGGGCTGG ATGGCTCCCA CTACACGGGG
CTGCAGTTTC GCGGCGCCCG CGACCTGCTC GACGACCACG GCGATGCGGC AATCGGCGTT
TTCGGCGAGG GCGGGCTCGC GGGGGAAACG GCCGTGCACG GAACGGCCGC GAAGTGGATG
GAGTGGCACG CCCAGAAAGA CACCACGCTG CATCGCGTCA CCATTCGTTT CGAAAACCAC
ACCGGGCCGC TGCACTGGTT CGTGCGGCGG CACAATCCGC TCGCCGCGTT CCCGTTTCAG
TACGAACACG ATTTGTCCTT ACCGCCGACC GGACGGCTCG AGATCGATCA CACCCTTACT
TTTACCGACG CATAA
|
|---|
| Protein sequence | MKPELDFALP TDGVVEIRCR KGPMLARYVY LPNTPLAESP RPYFHPLCSM AGEELTCFRP
NDHPWHHGLS FTINQVSGHA FWGGPTYRQP DGYQWRTDHG RQWHVEWHKR CAEQLAHTIE
WQTGARETLL REQRVLSFKV LGPAAWQLRW QAELVNVTSR ALELGNPFSS EGLDGSHYTG
LQFRGARDLL DDHGDAAIGV FGEGGLAGET AVHGTAAKWM EWHAQKDTTL HRVTIRFENH
TGPLHWFVRR HNPLAAFPFQ YEHDLSLPPT GRLEIDHTLT FTDA
|
|---|
| |