| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2881 |
|---|
| Symbol | |
|---|
| ID | 6208166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3679496 |
|---|
| End bp | 3680641 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641692546 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001819762 |
|---|
| Protein GI | 182414696 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTC ACCGCCTCGG CATCATCATG AACGGCGTCA CCGGACGCAT GGGCACCAAC
CAGCATCTAA TTCGCTCCAT CAAGGCGATC ATTGATCAGG GCGGCGTGAA GCTCGGCGAC
GCGGAGACGA TCCTGCCCGA TCCGGTTCTG GTCGGCCGCA GCGAGGACAA ACTCCGCGCC
CTCGCGGCCC GCACCGGTGT GAGCCGCATC TCGACCAACC TCGACGCCGA ACTTGCGAAT
CCCGCGAACC AGATCTACTT CGACGCCACC CTCACCGGCC AGCGCCCAAT CGGCGTGCGC
AAGGCGATCG CGGCGAAAAA ACACATCTAT TGTGAAAAGC CCACCGCGAC CAGCTCCGCG
GAGGCGCTCG CCCTCGCCCG CGAGGTCACG GCCGCCGGGC TCAAAAACGG CGTCGTGCAG
GACAAGCTCT GGCTGCCCGG GCTGCTCAAG CTGAAGTACC TAATCGATAC CGGATTCTTT
GGCCGGATTC TTTCCGTGCG CGGCGAGTTC GGCTACTGGG TCTTCACCGG TGAGCACGAA
CCGCTGCAGC GCCCGTCATG GAATTATCGC AAGGAGGAGG ACGGCGGCAT CATCACTGAC
ATGCTCTGCC ACTGGCAGTA TGTGATTCAG AATCTCTTCG GCGAGGTCAA GGCGCTCACC
TGCCTCGGTG CGACACACCT CCCGGAACGT TGGGACGAGG CCGGCCGGAA ATACCAGGCG
ACCGCCGACG ACGCAGCGTA TGCGACGTTC GAGCTGCACA ACGGGATCAT CTGCCACTTC
AACTCCTCCT GGACCGTGCG TGTGCGCCGG GACGATCTGC TCACGCTGCA GGTTGACGGC
ACGCACGGCA CCGCGGTCGC CGGCCTGCGT GATTGCACCG CCCAACATCT CTCCGCCACG
CCGCGCTGTG TGTGGAACCC GGATATCGAC AGCCCGGTGA AATTCTTCGA CGGCTGGACC
CGCGTGCCCG ATCAGCGCGT CTACGACAAC GCGTTCAAGG TGCAGTGGGA GCTCTTCCTG
AAACACGTCG TCACGGGTTC GCCGTTCCCC TGGACGCTAC TCGAAGGCGC CAAGGGCGTG
CAGCTCGCCG AACTGGGCCT CAAATCCTGG GCCGAGCGCC GCTGGGTCTC CGTGCCGAAA
CTATAG
|
|---|
| Protein sequence | MKTHRLGIIM NGVTGRMGTN QHLIRSIKAI IDQGGVKLGD AETILPDPVL VGRSEDKLRA
LAARTGVSRI STNLDAELAN PANQIYFDAT LTGQRPIGVR KAIAAKKHIY CEKPTATSSA
EALALAREVT AAGLKNGVVQ DKLWLPGLLK LKYLIDTGFF GRILSVRGEF GYWVFTGEHE
PLQRPSWNYR KEEDGGIITD MLCHWQYVIQ NLFGEVKALT CLGATHLPER WDEAGRKYQA
TADDAAYATF ELHNGIICHF NSSWTVRVRR DDLLTLQVDG THGTAVAGLR DCTAQHLSAT
PRCVWNPDID SPVKFFDGWT RVPDQRVYDN AFKVQWELFL KHVVTGSPFP WTLLEGAKGV
QLAELGLKSW AERRWVSVPK L
|
|---|
| |