| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2851 |
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| Symbol | |
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| ID | 6208895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3638917 |
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| End bp | 3641604 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641692515 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001819732 |
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| Protein GI | 182414666 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.17629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0410464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC GGTCACAGGT GTGGGCAGGC ATTCACCGAC TGGGGTTGGC CATGGCGCTC
GGGTGGCTCG CACCGGCGCC GCTGCTCGTC GGCCAGACGC CGACGGAAAC CAAGATTCGG
CTGATGGCTG ATGCGCTGCG CGCGCGAGAT GCGGGGGAAT TGGAGCGGGC GCGGAAAATT
GCGGAGGAAC TGCAGGTGCT GTTGCCCAAC GATCCCGCCG CGCGTCGGCT GCTGGAAGAG
ATCGATGCGC GCATCGCCGC GCGGGACGAA GCAGCGCGCA ATCCGAAACC GCCGCCGATG
CAGGAGGTGC AGATTCCCGA GCCCACCCAG CCGCGGGCGG ACGCGAACCG CTCGGCGGGG
CCGCCAACCA CGCCGGCGAG TTCCTCGGCG AACGACGTGC CCGTCGACCT GCAAAACGAG
GCGGATCAGC TGGCGCGAGC CGAGGCGCGG CGAATCGAAA GCCTCGTGGC GGAGGTGCCG
CGGCAGCGGC AGCGCGCCCG GCGACTCGCG GCCGCAAGCC GGTTCGACGA GGCGCTGGAC
CTGCTCGATG CGGCGATCGC AGCGCTGCCC GCGAATCCTG CGACGAAGCA AGCGGTGGCG
GATCTCGAGG CCGAGCGGGA ATCGATTGCG ACAAAGCAGC CGCGCAAGCC GGCGGACAAA
TCGTCCGCGG ACACGTCGGG CACGCCGTCG GCTCGCACTT CGGAGCGGGC ACGGAGCGGA
CTCCAGCACG ATCCCCCCGA GCGCTCAGAC GGGCTGGCGC AACGGATCGC GCGCGGTCGC
AGCCAGTATC TGGCGGGCGA TTTCGAAGCC GCGCTGATTA CCTTCCGCGC GGTGGAGCAG
AGCGATCCGG GGAACCAGCA GGCGAGGGAG TTTTTGGCAC GGATGGCGGG AGAGGGGATG
ACGGGGAAGA TGAGCCGGGA GCAGACGCGG GCGCGGTTGT TGGCGGACGT GACGAAAAGC
TGGCAACAGC CGCCGACCAT GGACCGGCCA GCGAACGAAA TCGGCGCGCT CGAAGTCGGC
GCGGGCTTGC GGCGAAAATT GGAGTCGATC GTGCTGCCGA GCGTGAGTTT CACACGCACG
GAGATTGGAC AAGTGGTGGC GGCGCTCGGC GCGATCGCGG AGGAGTTCGA TACAGGCGTC
GAACCGAAAG GCGTGAACAT CGTGCTGCTC GATCCGAGCC ACAAAAAGCC AACGGTTACG
CTCACGCTGC GCAACACGCC CTTGAATCGC GTGCTCGACT TCGTGACCGA ATCGATCGGC
TACCAGTATG AGGTGCAGGC GGACGCCGTG GTCGTGCGGC CCGGCGGCGA CAACGGGGTG
CTCGACACGC GATTTTTCCC GGTGGCCAGG GCGACGGTGC TCCGGATGAC CAACGGCGGC
GCGCCGGCGA ATGTCACCGC CACGCGCGCG GAGCCGGTGG GCGGGTCCGC CGCGCCGATC
CCTCCCAGTG CGGCGAGCGA GGGGCCCGCG CTACGTGCGT TTTTGCAGCA GGCCGGGGTG
AACTTCGACG CCGTCGCCGG CGCGAGCCTC GCCTACGACG GGGCCGCGTT GATCGTGACG
CAGACGCCGC GGAATCTGGC GCGGATCGGC AACCTGCTCG AACGCTACCG CGACGTGCGC
CAGGTGGAGA TCGAGGCGAA GTTCCTCGAG GTGCAGGAAG GCGCGCTTGA GGAATTGGGC
GTGAACTGGA CCGTCGCGAC CAAGGCGACC CAGCGCAACG CCGGCGCCAA CGCACGCTAC
CAGACGAGCG GCCGGGCCCT GGCTTCCGCC TTCAACGATG CGACCGGCGC GCAACAGGGG
AGAATCGTGC GGCCGGCGCT GCCGTCCGTG TTCGCCGATG AAAACGAGAA CGGCGTCTAC
GATCCGGGCG AACCGGTGAC CTCCAGCGCA CAGATCGGGA TCGACCTGCC GATCGTGAAC
AACGCGCCGC GGATTCCCGG TGGCGCGGAT CTGGCGCTGG GCGCGGGCCC GCTCGCCACG
ATCAGCGGCG TGATCGGCGA GTTCGACGTG AACGCGGTCG TTCGCGCGCT TTCCCAACAG
CAGGGCACCG ATCTGCTTAG CGCGCCGAAG GTGACGGTGC TGTCCGGCAA CCCGGCGACG
ATCACCGTCG CGCAGGAGAT GCGGTATCCG CAAAGCTTCG GGCAGACGCA GAGTCAGGTC
GGTACCGGCA ACGCGAGCGG CGGCGGCTCG GCCGGCGTCG CGATCACCGC CGGCACGCCG
CAGGAATTCA CCAAACGCAA CATCGGCGTC GAGCTGCGCG TGACACCGAC GGTGGAGGAG
GACGACTACA GCATCAGCCT CGATCTGAAT CCCAAGGTCA CGGAGTTCGA TGGCTTCGTC
GAATACGGCG GGCCCAGCAT CGCGATCTCC GGCAGCACCA CGGTGACCGT GCCCTCCGGC
TTTTATCAGC CGATTTTTTC CGTGCGCGAC ATTGCCACGA AGGTGACGAT TTGGGATGGC
GCGACGCTTG TGATGGGCGG ACTCACGCGC GAAGAGGTGA AAAAGGTGAA CGACAAGGTG
CCGATCCTCG GCGACCTGCC GCTGATCGGC CGGGCGTTCC GCTCGAAAGG CGAGAGCGCG
CAGAAGCGCA ATCTGCTGAT TTTCGTCACG GCCAACCTGG TCAATCCTGG CGGCGCGCCG
AAGAAGCTGC GGATGGAGCA GCTCGCGGCG ACGGCGCTGG AGCGATAG
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| Protein sequence | MKTRSQVWAG IHRLGLAMAL GWLAPAPLLV GQTPTETKIR LMADALRARD AGELERARKI
AEELQVLLPN DPAARRLLEE IDARIAARDE AARNPKPPPM QEVQIPEPTQ PRADANRSAG
PPTTPASSSA NDVPVDLQNE ADQLARAEAR RIESLVAEVP RQRQRARRLA AASRFDEALD
LLDAAIAALP ANPATKQAVA DLEAERESIA TKQPRKPADK SSADTSGTPS ARTSERARSG
LQHDPPERSD GLAQRIARGR SQYLAGDFEA ALITFRAVEQ SDPGNQQARE FLARMAGEGM
TGKMSREQTR ARLLADVTKS WQQPPTMDRP ANEIGALEVG AGLRRKLESI VLPSVSFTRT
EIGQVVAALG AIAEEFDTGV EPKGVNIVLL DPSHKKPTVT LTLRNTPLNR VLDFVTESIG
YQYEVQADAV VVRPGGDNGV LDTRFFPVAR ATVLRMTNGG APANVTATRA EPVGGSAAPI
PPSAASEGPA LRAFLQQAGV NFDAVAGASL AYDGAALIVT QTPRNLARIG NLLERYRDVR
QVEIEAKFLE VQEGALEELG VNWTVATKAT QRNAGANARY QTSGRALASA FNDATGAQQG
RIVRPALPSV FADENENGVY DPGEPVTSSA QIGIDLPIVN NAPRIPGGAD LALGAGPLAT
ISGVIGEFDV NAVVRALSQQ QGTDLLSAPK VTVLSGNPAT ITVAQEMRYP QSFGQTQSQV
GTGNASGGGS AGVAITAGTP QEFTKRNIGV ELRVTPTVEE DDYSISLDLN PKVTEFDGFV
EYGGPSIAIS GSTTVTVPSG FYQPIFSVRD IATKVTIWDG ATLVMGGLTR EEVKKVNDKV
PILGDLPLIG RAFRSKGESA QKRNLLIFVT ANLVNPGGAP KKLRMEQLAA TALER
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