| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2757 |
|---|
| Symbol | |
|---|
| ID | 6206796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3528731 |
|---|
| End bp | 3530086 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641692418 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001819638 |
|---|
| Protein GI | 182414572 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0186893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.238048 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTTT TCGCGGCTGA TGAGCTGACT TCGCACAAGG TGAAAAAGGT TCTTGTCGTC
AGTCCGCATT TTCCGCCCAT CAACGCGCCA GACATGCAGC GGGTGCGCAT GGCCCTGCCG
CACCTTCGCT CGCTCGGCTG GGAGCCCACC GTGCTGGCGC TGGACCCCGC ATCGATCGAA
GGAGGTGTAC GCGAGCCCCT GCTCGAGACC ACCTACCCGG CGAATGTGCG AATCGTCCGC
GCACGCGGGA TTTCGCCGGC CCTGACACGG CGGTTCGGTT TCGGCGGGCT CTGGCTTCGC
TGCGGTCGGG CGCTGCGCGT TGCCGGAGAG AGCTTGCTTC GTGGCGAGCG GTTCGATCTC
GCGTTCTTCA GCACCACACA GTTCGACGCG TTCGCGCTGG GGCCTCGGTG GCAGCGAAAA
TTCGGGGTGC GCTATGTCTT CGACTACCAG GATCCGTGGA TCAACCCGTA CTACGCTCGC
ACCCGAACCC GCCCGCCCGG GGGAAAGTTG AAATTTGCGT TTGCCCAATT CCGCGCGCGC
CGACACGAGC CCGGCACGTT GCGTGATGCC TCCGGTATCG TGGCGGTCTC TGACGCTTAC
GGACCCATGC TGGCGCAGCG CTACCCGTGG TTCGATGCGA CTCGCGTTGT GTTTCTGCCC
TTCGGCGCGG CGGACGGGGA CCTGCAAATC GCCCGCCAAC ACACTCCCAC GAGCCTGCTC
GTTCCACGGG CAGACGGTCT CATTCACCAT GTTTATGCGG GCCGTGGTGG GTCGGACCTG
GCGCCAGCCG TTACGATGCT TCTGCAGGGG TTTAAGCGCT ACTTGAATTC GGATCCCGCG
GCCGCCGGAC GCCTGCGTCT CCATTTCATC GGCACGAGCT ACGCGCCCGG GGCCGCTGCA
GCCGAGTCAA TCATGCCCAT CGCGCGCGCG CTCGGCGTGG ACGCATTCGT GCAGGAGCAT
CCCACCCGTG TGCCGTATTT CGACGCGCTT TCTTACTTGA TCAATGCGGA CGCCATTCTC
GCCCTGGGCT CGCAGGACGC CACCTATAGC GCGTCAAAAA TTTTCCCGTA TCTTCTAGCC
CGGCGCCCGC TTCTCATCCT TTTCCATCAT TGCAGCGCGG TGCATTCGAT CGCCGAATCG
GCGGGCGCGG GCCTAAGGAT CGCTTTCGGC CACGACACCG ACGTCGAACA GACCGCCGCG
CATATCTTCG AGCGGTGGTT CAAGGATGGC GCGTGGCGAC GCGTCCCCGT CGCGGCGCCC
GCCCAGCTGG AGCCCTTCAC CGCCGAAGCG ATGACCGCCA AACTCGGGGT TGTGTTCGAT
AACGCCGTGG GCTCCGTGCG CCGCGGCGCC GTCTAG
|
|---|
| Protein sequence | MAVFAADELT SHKVKKVLVV SPHFPPINAP DMQRVRMALP HLRSLGWEPT VLALDPASIE
GGVREPLLET TYPANVRIVR ARGISPALTR RFGFGGLWLR CGRALRVAGE SLLRGERFDL
AFFSTTQFDA FALGPRWQRK FGVRYVFDYQ DPWINPYYAR TRTRPPGGKL KFAFAQFRAR
RHEPGTLRDA SGIVAVSDAY GPMLAQRYPW FDATRVVFLP FGAADGDLQI ARQHTPTSLL
VPRADGLIHH VYAGRGGSDL APAVTMLLQG FKRYLNSDPA AAGRLRLHFI GTSYAPGAAA
AESIMPIARA LGVDAFVQEH PTRVPYFDAL SYLINADAIL ALGSQDATYS ASKIFPYLLA
RRPLLILFHH CSAVHSIAES AGAGLRIAFG HDTDVEQTAA HIFERWFKDG AWRRVPVAAP
AQLEPFTAEA MTAKLGVVFD NAVGSVRRGA V
|
|---|
| |