| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2734 |
|---|
| Symbol | |
|---|
| ID | 6205670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3494602 |
|---|
| End bp | 3495960 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641692395 |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_001819615 |
|---|
| Protein GI | 182414549 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.098751 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCT GCTGTATCGG AGCTGGCTAC GTTGGTGGAC CCACAATGGC GATGATCGCC
TGCAAAGCTC CGGACATCGA GGTTCGGGTC GTGGACATGA ACGCGGCGCG GATCGCCTCG
TGGAATTCCG ACGCGCTGCC CGTGTATGAA CCCGGTCTCG ACGACGTCGT GAAGGAGGCG
CGCGGCCGGA ATCTGTTTTT CTCCACGGAC GTCCGGAGCG CCATCCAGGC TGCGGACATC
GTTTTCGTGG CGGTCAACAC GCCGACGAAA ACCTACGGGG TCGGCTCGGG CCGCGCGGCT
GATCTCCGTT TCATCGAATC CGTCGCGCGC ACGATCGCGG AGGTGGCCAC GACGCCGAAG
ATCATCGTTG AGAAATCGAC GATCCCCGTG AAGACCGCGG AGACGATCAA GGACATCCTC
GCGGCGAACG CGCGCGGCGT AAAGTTCGAG GTGCTGTCGA ATCCCGAGTT TCTCGCCGAG
GGCACCGCGG TGGAGGATCT CAAGCAACCC GACCGGGTGT TGATCGGAGG CGAGCGCACG
CCCGGTGGCG AGGCGGCGGT GCAGACGCTC GCCGACGTGT ATGCGCGCTG GGTGCCGCGC
GACCGGATCA TCACGACGAA TCTCTGGTCA TCGGAGCTTT CGAAGCTGGT CGCCAACGCA
TTCCTCGCGC AGCGGATCTC GTCCATCAAC TCGATCTCGG CGCTCTGCGA AGCGACCGGC
GCGGACGTCG ACGAAGTCGC GCGCGCAATT GGCAAGGACT CGCGGATCGG GCCGAAATTT
TTGAAGGCGT CGGTGGGCTT TGGTGGATCG TGTTTCCAGA AGGACATCCT GAACCTGGTG
TATCTGTGCG ACCATTTCGC ACTGCCTGAG GTGTCGAGCT ACTGGGAAAA CGTGGTGAAG
ATGAACGACT GGCAGAAACG GCGGTTCGCG ACGAAGATCG TTCGCGCGCT GTTCAATTCG
GTCGCGGACA AAAAAATCGC GGTCCTCGGC TTCGCGTTCA AGAAGGACAC CAACGACACC
CGGGAATCGC CCGCCATTTC GGTGTGCCGC GATCTGCTCG CCGAGCAGGC ACGTGTGGCG
GTTTACGATC CGCAGGTCAC CGAAGAAGAT ATCCGGCGCG AACTACTCGG ACCCGACAAG
CAGGACAGTC GATTGACGGT CGTGAAAAGC GCCTACGCGG CCGCGGAAGG AGCCCATGGG
CTCGCCGTGC TCACCGAGTG GGACGAGTTC AAGACGCTGG ATTTCAAGCG AATCTTCGAA
TCCATGGCGA AGCCCGCCTG TGTTTTTGAT GGTCGGAATA TCCTAAGTCT CGAAGCGCTT
AAATCGCTAG GTTTTAGGGT CTACGGGGTC GGGAAGTAA
|
|---|
| Protein sequence | MKICCIGAGY VGGPTMAMIA CKAPDIEVRV VDMNAARIAS WNSDALPVYE PGLDDVVKEA
RGRNLFFSTD VRSAIQAADI VFVAVNTPTK TYGVGSGRAA DLRFIESVAR TIAEVATTPK
IIVEKSTIPV KTAETIKDIL AANARGVKFE VLSNPEFLAE GTAVEDLKQP DRVLIGGERT
PGGEAAVQTL ADVYARWVPR DRIITTNLWS SELSKLVANA FLAQRISSIN SISALCEATG
ADVDEVARAI GKDSRIGPKF LKASVGFGGS CFQKDILNLV YLCDHFALPE VSSYWENVVK
MNDWQKRRFA TKIVRALFNS VADKKIAVLG FAFKKDTNDT RESPAISVCR DLLAEQARVA
VYDPQVTEED IRRELLGPDK QDSRLTVVKS AYAAAEGAHG LAVLTEWDEF KTLDFKRIFE
SMAKPACVFD GRNILSLEAL KSLGFRVYGV GK
|
|---|
| |