| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2691 |
|---|
| Symbol | |
|---|
| ID | 6206837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3445171 |
|---|
| End bp | 3445734 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641692351 |
|---|
| Product | lipoprotein signal peptidase |
|---|
| Protein accession | YP_001819572 |
|---|
| Protein GI | 182414506 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0597] Lipoprotein signal peptidase |
|---|
| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.550308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACG TTGCACCCCG CCCTGCCGAT GCCCCGGAGG GCGGATCGAA AATCGAGAAT
CCCCGATCGA GATTCCAGCG GCTGCTTGAT TACCGCCGTC TGCTCGCGAT CGGGTTCGCC
GTTCTGATCA GCGATCAGAT CAGCAAGTCC ATCGTCGCCG CTCGCCTGCC GTTTCCCACC
TATGGCGAAC CGGCGGCGAT CACGGTGGTG CCCGACTTCT TCTACATCGT CCACGTGGGC
AACACGGGCG CGGCGTGGAG CATGTTCTCG GGCCAGGGTA TGCTGCTCGC GCTGCTCGCC
GCGGCCACTC TCATCGCAAT CTTCCTCTGG CGCCGAGCCC TCGGGCTCCG GGATCGCATG
GCGCAAATCT CGTTCGGACT GTTGACCGGT GGGATCGCCG GCAATCTGGT CGACCGATTG
GTGCATGGAC ACGTCGTCGA CTTCATCGAC CTGCACTTCG GCACCTACGT CTACCCGACG
TTCAATGTTG CCGACTCGGG CATTTGCGCC GGCGTGATCC TCTACCTCTG GCACTCGTTC
CGCGAGCCGG GGCGGGCAAA GTAG
|
|---|
| Protein sequence | MTDVAPRPAD APEGGSKIEN PRSRFQRLLD YRRLLAIGFA VLISDQISKS IVAARLPFPT
YGEPAAITVV PDFFYIVHVG NTGAAWSMFS GQGMLLALLA AATLIAIFLW RRALGLRDRM
AQISFGLLTG GIAGNLVDRL VHGHVVDFID LHFGTYVYPT FNVADSGICA GVILYLWHSF
REPGRAK
|
|---|
| |