Gene Oter_2686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2686 
Symbol 
ID6207244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp3440281 
End bp3440793 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content63% 
IMG OID641692346 
Productanti-sigma-factor antagonist 
Protein accessionYP_001819567 
Protein GI182414501 
COG category 
COG ID 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGATA CAGCGGTGCA GCCTGTCTAT CTCGTCGACG CGTATTCCGA CCCCGCGGTC 
GTGCGCGTCA ACGGACGGGC GTGTTTCCAA AACAGCGCCT GTCTGCGGGA GTTCGTGACG
GAGATGTTGC GCCAGCAAAA AACCCGGTTC GTGTTCGATT TTCAAAACTG CTCGAGCATG
GACAGCACGT TTCTCGGGGT GCTGGCGGGC ATCGCGCTGG AGCTCAAGAA AGTGCCGGGT
GGCGGCAGTC TGGTGCTCGC GCGGATGGGC CCGCGAAATC TCGAGCTGGT GCGCAACCTC
GGGCTGCACC GACTCCTCAC GGTGGAGACG GGGGATTTCC CGATGACATT CGACGCGCAG
GCCACGCCCA TTCCGTGCCG GGATCAGACG GAGTTGGACC ACGCGCGGCT GGTGCTCGAG
GCCCACGAGA ACCTGGTCAC GGCCGACGAG AGCAATCGCG CGAAGTTCCA GGACGTGCTG
GCCTTCCTGA AAAACCGCGT GCAGCAGGGC TGA
 
Protein sequence
MPDTAVQPVY LVDAYSDPAV VRVNGRACFQ NSACLREFVT EMLRQQKTRF VFDFQNCSSM 
DSTFLGVLAG IALELKKVPG GGSLVLARMG PRNLELVRNL GLHRLLTVET GDFPMTFDAQ
ATPIPCRDQT ELDHARLVLE AHENLVTADE SNRAKFQDVL AFLKNRVQQG