| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2638 |
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| Symbol | |
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| ID | 6208021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 3383478 |
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| End bp | 3384413 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641692298 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001819519 |
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| Protein GI | 182414453 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.169577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.482426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCAC CTGTCATCGC CGTTTTCAGT GGCGGCACTT CCTCCGAACG CGAAGTCTCG
CTCGGCTCCG GTCAGGCGTG TGCGGCGGCG CTCGAGAAAT CGTTCCGCGT TGAACGATTC
CAAATCGACG CGGACGCACT GCCGGCGGGA CTCGATCCGC AGCGGCATGT GGTTTTTTCG
ACGCTGCACG GCACGTTCGG TGAGGATGGC GGGATGCAGC GGCTGCTCGA CGCGGCGGGC
ATGCACTATG CGGGCTGCGA TGCGGTCAGC AGCGCGCTGA CGATGGACAA GACGCTGACG
AAAGAGACGG CGGCGGCGAA GGGGATTAAG GTCATTCCCG GCGTGACGTT TCCGGCGGCG
AAGAAACCCC GGCCTGAGCA GGTGATCGAA CAGTTTGGCG AGCGGGTGGT GGTGAAGCCA
AACGCGGAAG GCAGCAGCGT CGGTTTGAAC CTGGTGGGCT CGCGCGAGGA GCTCACGCGC
GTGCTCGACG TAATCCAGAA CGGTCGCTGG ATCATCGAGC GGCGGATCTT CGGACGCGAA
CTCGCAGTGG GCGTGCTGAA CGGTCGGGCG ATGGGCGTGG TGGAGATCCG ACCGAAATCC
GGCGTCTATG ACTACGCCAG CAAGTACACG AAGGGGATGA CGAACTATCT CGCGCCGGCA
CCGCTGGACG CGGCGCTGAC GCAGAAAATT CAGGCGGCGG CGCAAACGGC GTTCGCGGCG
TGCGGTTGCC GCGATTATGC GCGTGTGGAT TTCATCCTCG GCGATGATCA CGAGCTTTAT
TTGCTGGAAA TAAACACCCT CCCCGGCATG AAGGAAACGA GCCTGCTGCC GATGAGCGCT
CGCTGCGAGG GGATCGATTT TACGGCCTTG GTGAAGGCAA TGGTCACGCC CGCGGTGCAG
CGTTTTCACG CGGCGCGGGC GTCGCGAAAT CCGTGA
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| Protein sequence | MDSPVIAVFS GGTSSEREVS LGSGQACAAA LEKSFRVERF QIDADALPAG LDPQRHVVFS
TLHGTFGEDG GMQRLLDAAG MHYAGCDAVS SALTMDKTLT KETAAAKGIK VIPGVTFPAA
KKPRPEQVIE QFGERVVVKP NAEGSSVGLN LVGSREELTR VLDVIQNGRW IIERRIFGRE
LAVGVLNGRA MGVVEIRPKS GVYDYASKYT KGMTNYLAPA PLDAALTQKI QAAAQTAFAA
CGCRDYARVD FILGDDHELY LLEINTLPGM KETSLLPMSA RCEGIDFTAL VKAMVTPAVQ
RFHAARASRN P
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