Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2612 |
Symbol | |
ID | 6206848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 3355794 |
End bp | 3356681 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641692272 |
Product | TPR repeat-containing protein |
Protein accession | YP_001819493 |
Protein GI | 182414427 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.609493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCCA CCCTGGTTCG TTCCCTCGCC TCACTCCTCC TGCTCCTCGT AGCCGTCACG GGTCTCCGCG CGCAAGACGC CCAACCGCCC AAGATTGATT TCCCCGCTCC AAGTCCGGCG GCGACGCTGA AACAGCGCGT CGGCCTGACC GACATCGAGG TCAACTACTC CCGTCCGGGC GTGAAGGACC GCCAGATCTT CGGCGGGCTC GTGCCTTACA ATCAAGTGTG GCGCACGGGT GCCAATGCCG CCACGAAGAT CAAGTTCAGC ACGGCGGTAA AGCTGAACGG CACGCCGGTC GCCGCCGGCA CCTACGAACT CTTCTCCATT CCGAATCCCA ACGAGTGGAC GATCATCGTC CACAAGGACT CGTCCGACTG GGGTGCCTAT CGTTATGACC CGAAAAACGA CGTCGTTCGC TTCGCCGCGA AGACAATCGC GCTGCCAAAC CTGATCGAGA CCTTTGCCAT TGGCGTATCC GATATCCGCG ACGAGAGCGC GATCCTTTAC CTCGCCTGGG AAAAGACCCG CGTGCCGATC AAGGTCGAGG TGGATGTCAC CAGCGTGGTG CTCCCGCAGA TCGAAGCGGT CATGGCGTCG AGCGCGGAGA AGAAGCCGTA TTTCCAAGCG GCGATGTTCT ACCTCGACCG CGACCACGAT CTCGCCAAAG CCGCCGAATG GATGGATGCC GCGGCCACCG CGCAGCCCGA CGGCTTCTAT ATCTACTACC ATCGAGCGCG CCTGCTCGCC AAACTGGGCA AAAAGGACGA GGCCATCGCC AGTGCGCAAA AATCCATCGA GATCGCACAA AAGGTCGGCG GACCGGCCAA GGACGAGTAT CTCCGGCTCA ACGAAGCGCT GCTGAACAAG CTGAAGTTGC AGTTCTAG
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Protein sequence | MPSTLVRSLA SLLLLLVAVT GLRAQDAQPP KIDFPAPSPA ATLKQRVGLT DIEVNYSRPG VKDRQIFGGL VPYNQVWRTG ANAATKIKFS TAVKLNGTPV AAGTYELFSI PNPNEWTIIV HKDSSDWGAY RYDPKNDVVR FAAKTIALPN LIETFAIGVS DIRDESAILY LAWEKTRVPI KVEVDVTSVV LPQIEAVMAS SAEKKPYFQA AMFYLDRDHD LAKAAEWMDA AATAQPDGFY IYYHRARLLA KLGKKDEAIA SAQKSIEIAQ KVGGPAKDEY LRLNEALLNK LKLQF
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