Gene Oter_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2612 
Symbol 
ID6206848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp3355794 
End bp3356681 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content61% 
IMG OID641692272 
ProductTPR repeat-containing protein 
Protein accessionYP_001819493 
Protein GI182414427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.609493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCCA CCCTGGTTCG TTCCCTCGCC TCACTCCTCC TGCTCCTCGT AGCCGTCACG 
GGTCTCCGCG CGCAAGACGC CCAACCGCCC AAGATTGATT TCCCCGCTCC AAGTCCGGCG
GCGACGCTGA AACAGCGCGT CGGCCTGACC GACATCGAGG TCAACTACTC CCGTCCGGGC
GTGAAGGACC GCCAGATCTT CGGCGGGCTC GTGCCTTACA ATCAAGTGTG GCGCACGGGT
GCCAATGCCG CCACGAAGAT CAAGTTCAGC ACGGCGGTAA AGCTGAACGG CACGCCGGTC
GCCGCCGGCA CCTACGAACT CTTCTCCATT CCGAATCCCA ACGAGTGGAC GATCATCGTC
CACAAGGACT CGTCCGACTG GGGTGCCTAT CGTTATGACC CGAAAAACGA CGTCGTTCGC
TTCGCCGCGA AGACAATCGC GCTGCCAAAC CTGATCGAGA CCTTTGCCAT TGGCGTATCC
GATATCCGCG ACGAGAGCGC GATCCTTTAC CTCGCCTGGG AAAAGACCCG CGTGCCGATC
AAGGTCGAGG TGGATGTCAC CAGCGTGGTG CTCCCGCAGA TCGAAGCGGT CATGGCGTCG
AGCGCGGAGA AGAAGCCGTA TTTCCAAGCG GCGATGTTCT ACCTCGACCG CGACCACGAT
CTCGCCAAAG CCGCCGAATG GATGGATGCC GCGGCCACCG CGCAGCCCGA CGGCTTCTAT
ATCTACTACC ATCGAGCGCG CCTGCTCGCC AAACTGGGCA AAAAGGACGA GGCCATCGCC
AGTGCGCAAA AATCCATCGA GATCGCACAA AAGGTCGGCG GACCGGCCAA GGACGAGTAT
CTCCGGCTCA ACGAAGCGCT GCTGAACAAG CTGAAGTTGC AGTTCTAG
 
Protein sequence
MPSTLVRSLA SLLLLLVAVT GLRAQDAQPP KIDFPAPSPA ATLKQRVGLT DIEVNYSRPG 
VKDRQIFGGL VPYNQVWRTG ANAATKIKFS TAVKLNGTPV AAGTYELFSI PNPNEWTIIV
HKDSSDWGAY RYDPKNDVVR FAAKTIALPN LIETFAIGVS DIRDESAILY LAWEKTRVPI
KVEVDVTSVV LPQIEAVMAS SAEKKPYFQA AMFYLDRDHD LAKAAEWMDA AATAQPDGFY
IYYHRARLLA KLGKKDEAIA SAQKSIEIAQ KVGGPAKDEY LRLNEALLNK LKLQF