| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2500 |
|---|
| Symbol | |
|---|
| ID | 6206909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3220574 |
|---|
| End bp | 3221212 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641692160 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001819382 |
|---|
| Protein GI | 182414316 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.487366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.938738 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTGGC TCAAAAAGAT TCTCGGCCGC GACGACAAGT TCTTCGATCT GCTTGAAGCG
GGCGCGGAGG AGGCGCGCAC CAGCGTCCTG TTGCTCTCCC AGTATCTGCA GACTCTGAAC
CGGGGCGGGC CGCCGCCGCA GTTGGATGAT TTCGTACAGA CGCGGCGGAA GGAAAAACGG
ATCCGGTACC AGATGATGGA GCAACTGAGC AAAACCTTCG TCACGCCGTT GGAACGCGAG
GACATCGAAG CACTCTCCTT CGCGCTGTAT CGGATTCCGA AGGCAATCGA GAAGATCGTG
GAGCGACTGT CGATTTATCC CGGCCGGGTG CCGCACACCG CGTTTCTGCG TCAGGCCGAG
CTGCTCACGA TGGCGGCGGA CGCGGTCGTT TTCATGGTCA AGGGTCTGCG CAGCGGCACG
CATCTCGAAA AGGTCCGCGA GGCCAACGAT CGGCTGCAGC ACGCGGAAGG CGAGGCCGAC
AAGGTGATGC TCGGCCTGTT GAAGGAGCTT TATCACGGTC CCTTCGACAC CAAGGAGCTC
CTCATCCTGC AGGAACTGTA TGAGATGGTG GAACAGGCGG TGGATCGCTG CCGCAATGCG
GGCAACATCG TCGTCCAGAT TGTGCTGAAA TATGCCTGA
|
|---|
| Protein sequence | MQWLKKILGR DDKFFDLLEA GAEEARTSVL LLSQYLQTLN RGGPPPQLDD FVQTRRKEKR
IRYQMMEQLS KTFVTPLERE DIEALSFALY RIPKAIEKIV ERLSIYPGRV PHTAFLRQAE
LLTMAADAVV FMVKGLRSGT HLEKVREAND RLQHAEGEAD KVMLGLLKEL YHGPFDTKEL
LILQELYEMV EQAVDRCRNA GNIVVQIVLK YA
|
|---|
| |