| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2470 |
|---|
| Symbol | |
|---|
| ID | 6206994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3176666 |
|---|
| End bp | 3177703 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641692129 |
|---|
| Product | ferrochelatase |
|---|
| Protein accession | YP_001819352 |
|---|
| Protein GI | 182414286 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0276] Protoheme ferro-lyase (ferrochelatase) |
|---|
| TIGRFAM ID | [TIGR00109] ferrochelatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.422721 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.796996 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAACC GCGCGGTCCT TCTCGTCAAC CTCGGCTCGC CCGATTCCAC CTCCGTCCCC
GACGTCCGGC GTTACCTCGA TGAGTTTCTC GGCGATGAGC GCGTCATCGA TCGGCCGGCG
CAGCCGTTCC GTTCGATCCT GGTGCATCGC ATCATCGTAC CGCGGCGTTC GCCCAATTCC
GCGCACGCCT ACGAGCAGAT CTGGACCAAG GACGGCTCGC CGCTGATCAT CACCTCGCGC
AACGTCCAGC AAAAGCTCGC CGCCACTCTC GGCCCCGAGA CGCCCGTCTA CCTCGCGATG
CGGTACGGGC AGCCATCGAT CGCCTCGGTC CTCGGCCAGA TCGTCGCCGA CGGCGTCAGC
GAACTGCTCC TGATCCCGCA GTATCCGCAT TACGCGATGT CCTCGTGGGA AACCGTCGTG
GTGAAGGTTT ACGAGGAAGC CGCACGCCAG GCGCCGCAGT TGCGCGTGAC CACGGTGCAG
CCTTTCTTCG ATGACGCGGA CTACATCGAA GCGTTGCACG CGGTCTCCGC GCCCTACTTC
GCCCAGCCGC ACGACTACGT GCTGTTCAGC TACCATGGCA TCCCGGTCCG CCACCTGTGC
AAGGCCGACT CCTCGCACGC GCACTGCCAG ATTGTGAACG ACTGCTGCAA CACGCCCTCG
CCCGTTCACG CCACCTGTTA CCGCGCCCAA GTGTTCGCCA CGACGCGCGC ACTCGCCGCC
CGCGCCGGCC TGGCGCCCGA CCGCCATTCC GTTTCGTTCC AGTCGCGCCT GGTCGGCGAA
CCCTGGCTGT CGCCCTACAC CGACCACGAG TTGGAACGGC TCGCGAAGGC TGGCATCAAA
CGAATTCTCG TGCTCTGTCC CGCCTTCCTC TCCGACTGCC TCGAGACGCT CGAGGAGATC
AGCGTCGCGG GGAAGGAGAC GTTCGTGCAG GCCGGCGGTG AATCCTTTAC GCAGATTCCC
TGCCTCAACG ACCAGCCGCC GTTCATCGAT TTTCTCGCCA ACCGCGTCCG TACTTGGCTA
CAAGCGAGTC ACCGTTGA
|
|---|
| Protein sequence | MPNRAVLLVN LGSPDSTSVP DVRRYLDEFL GDERVIDRPA QPFRSILVHR IIVPRRSPNS
AHAYEQIWTK DGSPLIITSR NVQQKLAATL GPETPVYLAM RYGQPSIASV LGQIVADGVS
ELLLIPQYPH YAMSSWETVV VKVYEEAARQ APQLRVTTVQ PFFDDADYIE ALHAVSAPYF
AQPHDYVLFS YHGIPVRHLC KADSSHAHCQ IVNDCCNTPS PVHATCYRAQ VFATTRALAA
RAGLAPDRHS VSFQSRLVGE PWLSPYTDHE LERLAKAGIK RILVLCPAFL SDCLETLEEI
SVAGKETFVQ AGGESFTQIP CLNDQPPFID FLANRVRTWL QASHR
|
|---|
| |