| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2413 |
|---|
| Symbol | |
|---|
| ID | 6206450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3103947 |
|---|
| End bp | 3106592 |
|---|
| Gene Length | 2646 bp |
|---|
| Protein Length | 881 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641692072 |
|---|
| Product | secreted protein |
|---|
| Protein accession | YP_001819295 |
|---|
| Protein GI | 182414229 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.41252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.548098 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCCTCG CTCTCCCAAC TTCCCTTTCT GGTAGGATAC GCCTGGCGGC GACGCGTGGT
GCGCTCGCGG CCGGGATTCT GGCCGGCTTC GCGCCGCCTA CAGGTTTGCA CGCCGCCGAG
CCGCTGCCAA AGCGGGTGTA TCATGCCGTC GCACTCAGCG GTGCGGCGCC GGCGATCGAC
GGGAAGCTCG ATGATGCATG TTGGCAGCAA GGCGAATGGG CGGGAGAGTA TCGGCAACGC
GAACCGTTCG AGGGGGCGAC GCCGAGCCTG CCGACTGAAT TGAAGATCCT CTACGATCAC
CGGAATGTCT ACGTGGCGAT CCGGGCGCAC GATCCCGAGA TCACGCAACA ACCGCGGCTG
CTGGGGCAGC GCGACGAGTT TTCCGGCGAC ATGGTGGGCG TGGCGTTCGA CAGCTACCTG
ACGCGCCGCA CTTCGTTCGA GTTCGATGTC ACCTCGGGCG GATCGAAGAT CGACCTGGTG
TTGCGCAACG ACGGTTCGGT CGACACGAGC TGGGATGCGA TCTGGGACGT GAAGGTGGCG
GTCACGCCGG AGGGGTGGAG CGCCGAGTAT CGGATCCCGC TGAGCCAGCT GCGCTATTCG
AAAGCAGGCG AGCAGGTGTG GGGATTGCAC AGCTGGCGCT GGATCCGGCG GAAGCAGGAG
GAGAGCAACT GGCAGCTGAT CCCGATGGAC AACGGCGGCG TCGTGCACGC GTTCGGCGAG
CTGCGCGGAA TCCGGAACCT GCCGCCCTCG CGACGAATCG AATTGCTGCC GTATCTGGTG
GCGAAGTCGG AGTCGTTGGC GAAGGAGGTG GGCAATCCCT ATCGCGCGAA AGACGAAACC
TCGCTCGAGG CGGGGCTCGA CGCTAAGCTA GGACTCGGCA GCGATTTCAC GCTCGATCTC
ACGTTGAATC CGGACTTCGG CCAGGTGGAA GCGGATCCGT CGGAAATCAA CTTGAGCACG
GTCGAGACGT TCTTTCCGGA GAAGCGGCCG TTCTTCATCG AGGGGAAGGC GATGTTCGAC
TACGGGATCG ATTCGGACCT GCCGTTCTAC TCGCGGCGGA TCGGCGACGG GCCGTCGCTC
GCGACCGATG ATCTGCCCGG CTACGTGAAG ATGCCGGCGA GGAATCCGAT CCTGAGCGCG
GAGAAGATCA CCGGGCGGAC GGCGGGTGGG TTCTCGCTGG GGCTGCTCCA TGCGCTCACC
GGTCGAACCG AAGCGAGGAT CACGGAGCTA GGCAGCGGCG AACGGCGGGT GGTGGCGGAG
CCGCGGGCGA ACTACGTGGT GGTGCGAGGG CAAAACGATT TCGCCGGCGG CGACACGATC
GTCGGCGGGA TTTTTACCGC GACGATTCGC GATGGCAGCG ACGAGGAACT CGCGCTGCTG
GCGCGGCAGG CGGTGACCGC GGGCGCGGAC GTGACGCACT ATTGGAACCA GCGGACGTAT
TTCGTGGAAG CGCGCGCGCT GGCGACGCAG CTCGAAGGAT CGCCGGCGGC CTTGGCGGAG
TTGCAGCAGA ATCTGGTGCA CAACTACCAG CGGCCGGACG CGGCGCACAT CGAGTTCGAT
CCGGAGGCGC AGGAGCTGAC CGGACATGCC GGTCGGGTGC GAGCGGGGAA GAGCAGCAAC
GGCCACTGGC GCTACAACGG TGGCGTGAGC TGGCGTTCGC CGGGTGTGGA TTTCAACGAC
CTGGGCTATC TCGCGACGGC GGACTTCGCC GAGTATGCGG CGCAGCTGCA GTATTATTCC
GCGGAGCCGG GCCGCTGGTT GCGGCGGCGC GACGTGCGGC TCCGCCCATC CATCACGAAA
AACTTCGACG GTGAAACGCT GGAGCATGAG CTGACCCTGA CGACGGAATG GGCGGGCATG
CGCGGCTGGT ATGTCTGGGC GGAGACGGAA GTGGAGGCGG CGCGACTGGA CACGCGGGTG
CTGCGCGGTG GGCCGGCGCT GCGGCGGCCG AATCGGTTTC CGTTTTGGAT CTATGCGGAG
AGCGATGGCG CGCGGAAAAC CCAATTCAAG ATGAGCGCCG GCGGCGCGAA GCTCGCAGGG
GAGGGGTCGT CTTACTACGA GTTTGAACCC GGGATCGTGC GGCGGTTTGG CGATCGCGTA
CGCGCAGATG TGAAGATCGG TTTCTCGGAA AGCCGCCAGG AGCGACAGTA CGCCGGGCAG
ACAGATACGC CGGCGGGCAC GCGCTATGTG ATGGGGCGGA TGGATCAGAA ATCGCTTTGG
GCGCAGCTGC GGCTGCAGGC GAATTTCTCG CCGACGCTCT CGCTGACGTA TTTTGCGGGG
CCGTATGCGT CGACGGGGCG GTTCGACCGA TTCAGCGTCG TGGCGCGGCC GCGCGCAGCG
GACAACGACG ACCGGTTCGA ATGGCTCGAC ACGACGCGGG CCGATGCGGA TGGCTACACG
GCGCGCTGGC GGACCGAGAC GTTTCGGTTC GATGATCCGG ATTTCGACTG GCGCGAGCTG
AACTCGAATC TGGTGCTGAA GTGGGAATTC CGGCCGGGCT CAACGCTGTA TGCGGTCTGG
TCCCAGCACC GCGGAGACGA TCGGGATTTA GGAACGTTCA CGTATGCCGA CGAATATCGC
CGGCTGCTCG AGACGCATCC GGACAACACG TTTTTGGTGA AGATGAGCTA CTGGTTCTCG
ATCTGA
|
|---|
| Protein sequence | MVLALPTSLS GRIRLAATRG ALAAGILAGF APPTGLHAAE PLPKRVYHAV ALSGAAPAID
GKLDDACWQQ GEWAGEYRQR EPFEGATPSL PTELKILYDH RNVYVAIRAH DPEITQQPRL
LGQRDEFSGD MVGVAFDSYL TRRTSFEFDV TSGGSKIDLV LRNDGSVDTS WDAIWDVKVA
VTPEGWSAEY RIPLSQLRYS KAGEQVWGLH SWRWIRRKQE ESNWQLIPMD NGGVVHAFGE
LRGIRNLPPS RRIELLPYLV AKSESLAKEV GNPYRAKDET SLEAGLDAKL GLGSDFTLDL
TLNPDFGQVE ADPSEINLST VETFFPEKRP FFIEGKAMFD YGIDSDLPFY SRRIGDGPSL
ATDDLPGYVK MPARNPILSA EKITGRTAGG FSLGLLHALT GRTEARITEL GSGERRVVAE
PRANYVVVRG QNDFAGGDTI VGGIFTATIR DGSDEELALL ARQAVTAGAD VTHYWNQRTY
FVEARALATQ LEGSPAALAE LQQNLVHNYQ RPDAAHIEFD PEAQELTGHA GRVRAGKSSN
GHWRYNGGVS WRSPGVDFND LGYLATADFA EYAAQLQYYS AEPGRWLRRR DVRLRPSITK
NFDGETLEHE LTLTTEWAGM RGWYVWAETE VEAARLDTRV LRGGPALRRP NRFPFWIYAE
SDGARKTQFK MSAGGAKLAG EGSSYYEFEP GIVRRFGDRV RADVKIGFSE SRQERQYAGQ
TDTPAGTRYV MGRMDQKSLW AQLRLQANFS PTLSLTYFAG PYASTGRFDR FSVVARPRAA
DNDDRFEWLD TTRADADGYT ARWRTETFRF DDPDFDWREL NSNLVLKWEF RPGSTLYAVW
SQHRGDDRDL GTFTYADEYR RLLETHPDNT FLVKMSYWFS I
|
|---|
| |