| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2345 |
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| Symbol | |
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| ID | 6207789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 3036261 |
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| End bp | 3036701 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641692001 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001819227 |
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| Protein GI | 182414161 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.231311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0225242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGGAC CTGCTACCAA ATCGGTTGTA CCTGAAGAAG GAAAGAAGAA GGCACGTATC
GAGATCATTC CGCTGATCGA CGTCATCTTC TTCCTGCTCG CCACCTTCGT TCTCTTCACG
CTCTCGCTGA ACAAAATTCA GTCCGTCCCC GTGAACCTGC CCGTGGCGTC GACTGCCTCT
TCGTCCAAAT CGGACGACGA CACAGTCACG CTGCAGATCT CCGACCAAGG CACCTGCTAC
TGGAACAAGG AGCTGATCAA CCTAAGCGAG ATCCGCCCGC GGCTCGCCCA CTACAAGACC
CAGGTCGCGG TGCCGCGCGT GCTCATCGCC GGCGACGACA AGGCCAAGTT CGGCATCACG
GTCCAGGCAC TGGACGAGGT GCGCAAAGCG GACATTCAAC AGGTCTCCGT CGAGACCCGC
GTGCGCCCCA CGGGCCGCTA A
|
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| Protein sequence | MAGPATKSVV PEEGKKKARI EIIPLIDVIF FLLATFVLFT LSLNKIQSVP VNLPVASTAS
SSKSDDDTVT LQISDQGTCY WNKELINLSE IRPRLAHYKT QVAVPRVLIA GDDKAKFGIT
VQALDEVRKA DIQQVSVETR VRPTGR
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