| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2340 |
|---|
| Symbol | |
|---|
| ID | 6205906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 3031673 |
|---|
| End bp | 3032560 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641691995 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001819222 |
|---|
| Protein GI | 182414156 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.505154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00888512 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTGC ACCCCGTCGC GTCCCGCGGT AGCTTCGGCC TCGCCGTGTT GAACCCAGTG
CCGTTGGAGG ACGAACTCGG CGATGTGCTG GAAAAAGCCA TGCGCCAGAT GGGCCTCACC
GAGGAGGCGT TGGGGGACCG TGCGCACGTG GATTCGAGCC GGATTCGCGA TGCGATCGAC
TACCGCTCGG ACCTCTCCGG AGCCGAGTTG CGACGGCTTG CGGCCGTGCT GCGGCTCAAC
GAAGTCGGAT TGTGTGCGCT CGGCTGCAAC CAGTATCCGC TGCCCGTGCT GGGCGCGTTG
CCGTTCTGCG TGCATCCGCT GCGGATTCCC TATGGCATCG GCGTCACCAA CGCCTACATC
GTGACGCCGT GCGGCGGCTC CCGTGGCATT CTGTTCGATA CGGGGCCGGG AATCGCGGCG
ATGGAGGAGG TCTGGCCGGA CGCGGTGCGT CAGATCGAGG CCGTTTTCCT CACTCACGTG
GAGGCCGAGC ACACCGGCGG GCTGTGCGAT CTGGTCGAAC GGTTTCAGGT GTCCGCCGCC
TATCATCCGG TCGGTGCGGT GGTGCCCTGC GGCCAGCCCC TCGGAGAAGG GGAACGGAAG
GTATTCGGCC GGGTGCAGGT CACCGCGTTC AGCACGCCGG GGCACGCACT GGCGCACAAC
TGTTACCTCG TGGAAAGTCT GGTCGCCGCT CGTGGGCGGG CGCTCCTGAT CTCCGGCGAT
CTGTTTTTTG CGGGCTCCGT CGGATGCGCG CATCACTGCC AGCGGCAGCT GGCGACGAAC
CTGGGGCGGA TGTTGCAGGC GATTCCGGCT GATACGGTGA TTGCGCCGGG GCACGGCCCG
ATGACGACGG CCGAGAACGA GCTGCGCTAC AATCCCTTCG TGAGCTGA
|
|---|
| Protein sequence | MILHPVASRG SFGLAVLNPV PLEDELGDVL EKAMRQMGLT EEALGDRAHV DSSRIRDAID
YRSDLSGAEL RRLAAVLRLN EVGLCALGCN QYPLPVLGAL PFCVHPLRIP YGIGVTNAYI
VTPCGGSRGI LFDTGPGIAA MEEVWPDAVR QIEAVFLTHV EAEHTGGLCD LVERFQVSAA
YHPVGAVVPC GQPLGEGERK VFGRVQVTAF STPGHALAHN CYLVESLVAA RGRALLISGD
LFFAGSVGCA HHCQRQLATN LGRMLQAIPA DTVIAPGHGP MTTAENELRY NPFVS
|
|---|
| |