Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2291 |
Symbol | |
ID | 6205935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2953324 |
End bp | 2955339 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641691946 |
Product | hypothetical protein |
Protein accession | YP_001819173 |
Protein GI | 182414107 |
COG category | [S] Function unknown |
COG ID | [COG4688] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.031197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTTCAG GGCCGTTAAC GGACAGTCTG CTCCCCGACG ACCCGTTGGT GAAACTGGCT GCGTTTATCG CGAAGGCTAA ATGTTCACCT GCACTGAAGA GCATCAATTG GAACGATGTC GAATGGAAGC TGGATGCTTC CGACCCAATA GTTGAAAAAC AGCGCTCCCA CAAAAGCTAC GGTAGCAGTC TAGCGTTTAC GACTCGCGAC ACCTCAGGAC GGGGGCAGAT GCGGGTTCGG GCTTCAGAAA GGACAGCGAT TGCCTCGCCG TACGCTGATT TCGCGAAGGC CGACGTGCGT CTCCACGCCG AAGCGAATAA CGTGTCGATC AGTGTCCTGC GCCGGGACCT AACAGCTCAC CAGTTTTTGG AAAGGGAACT TCGTAGGACT GGAGAGACAA ACAGCATCGA CCAGCTCACA ATTCGGCATT TCGAATTTGC AGAAGAATCA ATTGCGAAAG AGCAGGCACC TAGCACGGCA TATAGGATCT CTCAGCAGTT GGTGCGGATC TCCAAGGTCA TCGACGAACG CCGTTTGACG GCGCGTCCGA TTGGGTACGA GACACGGCTG AAACGGCCCT TGGACGGAGA TGAGCTGACC GAGGAGGGGC AGGCTGAGGG GATGAAGAAA ATGATCTCTC AGGAAGCCTT GGATAAGCTC GCTGAGATTT TTGCGAATCC TGGCAGCGAT TACGAAAGAC TAATCATCTC GATCGTCGGA CTTTTCGTCG TTGGAGGCTT CCGCGCGGGC GAGGTCCTGA CGATCCCGGT AGATTGTTGG CAACACCAGC TTCAGCAGGG CGACTCACTT GATCCGAAGA CGGGTGTGAT ACTCGGGAAC CACGGTATTC TCTACGCAGC GGAGAAAGCG CAAGACTACC GAATAAAGTG GTTGCCCAAG GACGCCGTCG AAATGGCGCG CCGCTGCGTG GATGACTTGA CGCGGCTGTG CCAACTTGCG CGGGAGACGG CGGCGTGGAT GGAGGCTAGT CCCGGCCGAC TAAAGCCGTT CGCCGATCTT GAGCCGACGG ACTGGATCAG TGGACACGAG GCCTGCGAAC GGCTCGGGTT TGCGAAACAA ACACATGTCA ACTGGAAGAT ATTCCGTGAA AACCGCGCTA CTGTCGGCCG TGCTGGTCGG GCTGCGTGGT ACCGAGTTGG AGATATAGAA CAATGGTTCA ACTCGAACTC GGTGATCGAT CCGGTGATGA CAATGCCCAG CGGCAGGACG CAAAGACTGT CGGAAACGCT CGTTGTGGTA TTTCGGAATC AGTTTCACGG GAACCGGCCG GCTCTCAGCT TCATCCCCGA GTTGATGACC CATTCGGTCC TTTCAGGGGA GATTTCGCCG GCGCCTTCGC AGGAAGGGGA TCGTATCGGT ATCCTGTCAC GACATGGCCT GCGGGTTACA ACGAAGCAGT TCCGACATTG GCTAAATACG TTGGCTGACC GCGGTGGTCT GAATGGGATA GAGTTGGCGA AATGGATGGG CCGGCTCGAA ATATCTCAAA ATGCCGCCTA CAAACATGGG ACTCTAGCCA TTCGCACCGA GGCGGCGCAG AGCGTGATTC GCGCCGGCGA TGCTGAAGGG ACTATCCCTC GGATATACCG TTCACTGCCA CCGGCGGACC GCGAAGCCTT TCTGAAGGCC TCGATCACGG CGGCCCACGC GATGTCGTTT GGTATGTGCG TCCACAATTT CGCGCAATCG CCCTGTCCAA ACTGCAATCA ATGTCTGCGC AAATGCCCGG AATATATCCG GATCAAAGGC GACATGGAAC AACGGCAGGC GCTCCTTGAG ATGAAGGCCC TCGAGGAGCG GAATCTCCAG CGAGCGCAGG CAGCGCTCTG TGATTCTGAC GGGAAAGGTG GCTACTACGG GGCTGATCGC TGGGTGACCT GGTCGAAAGA AACTCTCGCG GGTATCGATG AAGCGCTGGC GGTGGATGAC GATGACGCGA TCAGCTCGGG ATCGCAGACA CGTGTGTTCG AGGAGACAAG GCAGATAGGA GACTAA
|
Protein sequence | MSSGPLTDSL LPDDPLVKLA AFIAKAKCSP ALKSINWNDV EWKLDASDPI VEKQRSHKSY GSSLAFTTRD TSGRGQMRVR ASERTAIASP YADFAKADVR LHAEANNVSI SVLRRDLTAH QFLERELRRT GETNSIDQLT IRHFEFAEES IAKEQAPSTA YRISQQLVRI SKVIDERRLT ARPIGYETRL KRPLDGDELT EEGQAEGMKK MISQEALDKL AEIFANPGSD YERLIISIVG LFVVGGFRAG EVLTIPVDCW QHQLQQGDSL DPKTGVILGN HGILYAAEKA QDYRIKWLPK DAVEMARRCV DDLTRLCQLA RETAAWMEAS PGRLKPFADL EPTDWISGHE ACERLGFAKQ THVNWKIFRE NRATVGRAGR AAWYRVGDIE QWFNSNSVID PVMTMPSGRT QRLSETLVVV FRNQFHGNRP ALSFIPELMT HSVLSGEISP APSQEGDRIG ILSRHGLRVT TKQFRHWLNT LADRGGLNGI ELAKWMGRLE ISQNAAYKHG TLAIRTEAAQ SVIRAGDAEG TIPRIYRSLP PADREAFLKA SITAAHAMSF GMCVHNFAQS PCPNCNQCLR KCPEYIRIKG DMEQRQALLE MKALEERNLQ RAQAALCDSD GKGGYYGADR WVTWSKETLA GIDEALAVDD DDAISSGSQT RVFEETRQIG D
|
| |