| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2288 |
|---|
| Symbol | |
|---|
| ID | 6206137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 2949619 |
|---|
| End bp | 2950098 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641691943 |
|---|
| Product | single-strand binding protein |
|---|
| Protein accession | YP_001819170 |
|---|
| Protein GI | 182414104 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0629] Single-stranded DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACT TCAACAAAGT CTATCTCATC GGCAACCTCA CGCGCGACCC GGAGCTGCGA
GTCACGCCCA AGGGCACGGC CATTTGTCAG TTCGGCATGG CGGTCAACCG CCAGTTCAAG
GACGAGTCCG GTGCGCTGCG CGACGACACG ACGTTCGTGG ACATCGAAGC GTGGGGTAAA
CAGGGCGAGA CGATCTCGAA GTATTGCACC AAGGGCCGCC CGCTGTTCGT CGAGGGCCGG
CTGAAGTTCG ACCAGTGGGA GGACAAGACC TCCGGCCAGA AGCGCAGCAA GCTGAAGGTT
GTGCTCGAGG GCTTCCAGTT CCTCGGCAGT GGTCAGCGCG ATGGCGCGCC GGGCGGTGGT
GGCGGCGGCG GGGAGTTCGA CCAGAGCGCG CCTTCGCCGG AGCGCCATGC GCCGCCCCCG
CGTGGTACGA GCGGCAAGCC GCCGGCCGCC GAGAACCTCG ACGAAGACGT GCCGTTCTAG
|
|---|
| Protein sequence | MANFNKVYLI GNLTRDPELR VTPKGTAICQ FGMAVNRQFK DESGALRDDT TFVDIEAWGK
QGETISKYCT KGRPLFVEGR LKFDQWEDKT SGQKRSKLKV VLEGFQFLGS GQRDGAPGGG
GGGGEFDQSA PSPERHAPPP RGTSGKPPAA ENLDEDVPF
|
|---|
| |