Gene Oter_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2173 
Symbol 
ID6206554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2793317 
End bp2793802 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID641691826 
ProductDoxX family protein 
Protein accessionYP_001819056 
Protein GI182413990 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.529053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.821104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCC TCGCTCGAAA GATTCAGGCC ACGATCCCGC TCCGCGCGGT GTTTCTCATC 
CGTCTCGCGG TCGGCGCGGT CTTCTTTTTC GAAGGCGTGC AGAAATTCAT GTATCCCGCG
GAGCTCGCCG CCGGCCGCTT CGCGAAAATC GGCATCCCTT GGCCGCAGTT TACGGGACCA
TTCGTCGGCG GCGTTGAAAT CGTCTGCGGT GCGCTCATCG TCCTCGGCCT CGTCACCCGA
CTGGCAGCCG TTCCGCTGCT GATCAACATC TCGGTCGCCA TCGTCTCGAC GAAGCTTCCG
ATCCTGCTCG GCCACGGCTT CGCCGGATTC ACGCTGGCCA AGCTCCCGCG TTACGGCTTT
CTCAGCATGA TGCACGAGGC GCGCACCGAT TTCACGATGT GGCTGGGACT GCTGTTTCTC
CTGCTCGTGG GCGCCGGGGG CTGGTCGATG GATGCCCAGC GTCGCGGGGC AAACCCGGAC
GGATGA
 
Protein sequence
MSSLARKIQA TIPLRAVFLI RLAVGAVFFF EGVQKFMYPA ELAAGRFAKI GIPWPQFTGP 
FVGGVEIVCG ALIVLGLVTR LAAVPLLINI SVAIVSTKLP ILLGHGFAGF TLAKLPRYGF
LSMMHEARTD FTMWLGLLFL LLVGAGGWSM DAQRRGANPD G