| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2062 |
|---|
| Symbol | |
|---|
| ID | 6206589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 2650124 |
|---|
| End bp | 2650930 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641691713 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001818945 |
|---|
| Protein GI | 182413879 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.380263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCAA CCGAACAGAT CCCGATGGTT TACCCGCACA CGTTGCGCCG GCTCTACTGG
CCGTTCGTTT CGCTCGCCGA GGCGTGCCCG GCGGTGATCG GAACGGATCC GGGATCGTTT
CGCTTGGGCG CACGGCGCTA CACGATTCCT CGGTTCACCT TTCTGGGACC GACGACCAAC
GTGCCCCAGA AACGGATCGG AGTGTTCGCG CTGCTGCACG GCGATGAGCC GGCCGGTGCG
CTGGCGCTGC TGAACCTGCT GACCACGCTC GTGGCCGACC CACAGCTGGC GAGCGGCTAT
GACCTGGTGA CGTATCCGCT CTGCAATCCG ACGGGCTACG AGGACGGCAC GCGCCACAAC
CGCGCGGGTC TCGACCTCAA CCGGCTCTTC TGGACCGGAT CGAGCCAGCC GGAGGTGCAG
ATCCTCGAGC GCGAATTGCG CGAGCAGGCC TTCGACGGAC TGATTGCACT CCACGCCGAC
GATACGAGTG AAGGGCTGTA TGGCTATGCA CATGGCCGCG AGCTCAACGA GGACCTGCTC
GTGCCGGCGT TGCGCGCGTC CGAGCGCGTG ATCCCCTGCA ATCACGACCC GCTGATCGAC
GGGTTCAGCG CGTGCGCCGG TGTGATCAAC GACTGCTTCA AAGGTGTTCT GCGCCCCGCG
CCCGAACAGC GGCCGCAGCC GTTTGAGATC ATCTTTGAAA CGCCCGGCCG CGCCTCACTT
GAGCTGCAGG CACAGGCAGC CGAACTGGCG GTGCTCAGCA TCCTGGCGGA ATACCGCCGG
TTCATTTCCT ACGCCCAGGA TCTCTGA
|
|---|
| Protein sequence | MVATEQIPMV YPHTLRRLYW PFVSLAEACP AVIGTDPGSF RLGARRYTIP RFTFLGPTTN
VPQKRIGVFA LLHGDEPAGA LALLNLLTTL VADPQLASGY DLVTYPLCNP TGYEDGTRHN
RAGLDLNRLF WTGSSQPEVQ ILERELREQA FDGLIALHAD DTSEGLYGYA HGRELNEDLL
VPALRASERV IPCNHDPLID GFSACAGVIN DCFKGVLRPA PEQRPQPFEI IFETPGRASL
ELQAQAAELA VLSILAEYRR FISYAQDL
|
|---|
| |