| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_2058 |
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| Symbol | |
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| ID | 6206845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2644743 |
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| End bp | 2646869 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641691709 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001818941 |
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| Protein GI | 182413875 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCGT GGTTCAGCTC GGTCGCTCGC CGGCTCGCAC TCGGCGCGAG CCTCGGCGTC
GTTGCACTGA CGGTGATCCC GAACCTCTCC TGTGCCGCCC GATCGGTCTC AGTTGCCGAG
ACGGAGTCGC TGCGAAGGCT GGAACTCCTC CGCGTGGAAA TCGCGCGGCA TGATGATTTG
TATTTTCGGA AGGCGCAGCC GGAGATCTCC GACGCGGACT ACGATGCGCT GAAGCAGGAG
CTGCGGGAAT TGGAGAGCCG TTTCGGCCGC AGGGTGCCAC GCGACCCGGC AGCGCTGCGC
GACATGGGAG ATGACCGGGT CTCGGGATTT CCGAAAGCGC GGCATCGGAT GCGTATGCTG
AGTCTGGAGA AGACCACGAC CGAGTCAGGC GTGCGCGCGT TCGATCAGGC TCTGCGTCGC
CTGGTGAAAC CACCGGCCGA AATCGCATAT GTCGTGGAGC CGAAATTCGA CGGGCTCGCG
ATCAGCGCCA CCTACGAGGA GGGACGGCTG GTGCGCCTCG TGACGCGCGG CAACGGCGAA
GAAGGGGATG ATGTGACGGC GGCCGCGGGT CGGATTCGGA CCCTGCCGCC AAGGCTCGCG
GGCGCGGCGT GGCCGCGGGT CGTGGAAGTG CGCGGTGAGG TTTTTCTGAC CTTTGCCGAA
TTTGAACGGA TCAATCGTGG ACGGCGCGAA AACGGGCGTC CCACCTTCTC GAGTCCGCGC
AACCTCGCGG TCGGTACGCT CAAGTCGCTC GAGCCCGAAG ATCGCGAGGT ACGCCAGCTC
GATGTCGTCT TTTTCGGGCT CGGCGCGATC GACGGACACG CGGCGCCGGC GAGCCAAACG
CAGTTGTTGG AGTGGATCGC GCAATGGGGA TTGCCGTCGG TCGAGGACGC ACGCCGGGTG
GACTCGATCG ACGACGCATG GCGGGCGGTG CAGGAGCTCG GCGGCCGTCG CAGCCATCTC
GCTTTCCCGA TCGACGGCGC GGTGATCAAG CTCGACGACG CGGTCGGTCA GACGGCCGCT
GGCGTGTCCG AGGTCGCGCC GCGCTGGGCG ATCGCGTTCA AATACGCGCC GGCGCGAGTG
GGCACGCGCG TTCGCGGCGT CGCGCTGCAG GTGGGCCGCA CGGGCGTGAT CACGCCGGTG
GCGGAATTGG AACCGGTTGC ACTCGCCGGC GCGAGGATCA CGCGGGCGAC GCTGCACAAT
GCCAGCGAGA TGGAGCGAAG CGACCTGCGC GTGGGCGATT TCGTGTGGAT CGAGCGAATG
GGAGAAATCA TTCCCGCGGT GGTCGCCGTG GACACGGCCC AGCGGGGCAC GGTGAGTGCG
CCGTTTGTTT TCCCTCGCGA TTGCCCCGGC TGCGGTGCCT TGCTCGTGCG CGCGCTTGAC
GACGCAAACT GGCGCTGCAC CAACGACGAC TGCCCCGCGC GGCAGGTGCG CAAGGTGGAG
CACTACGTTT CGGACGAGGG CGTGGGGATT CGCGGCCTTG GGGCGGCGAG TGTGGAGGCG
CTGGTGCGGA GCCAACGCGT CCGCGAAATT CCCGACCTTT ATACGCTCAC GGCCGCAGAG
GTGACGGCAC ACACACGGTT GTCTGCCGCA CAAGCGGCGC GTGTCGTCGA CGCGATTCAG
CGGTCCAGAA AGGCGCCGTT GCGGCGGGTG ATCGCGGGAT TGGGTCTGCC CGGCATCGGT
CCTGCCGGAG CGAATGCGCT CGGGGCGCGG TTTGCCGATC TGCCCCAGTT TGCGGCGGCC
CGGGAATCCG ACTTGCAGCA AGTCGAAGGG CTCCGTCCCG AATCGGTGCG CGCGCTGGCG
ACTGCTCTCA GTGCGGAACG CACGCAACAG CTGCTGGCGA GACTCGCGGC GGCGGGCGTC
GGCGCGCAAT CCGCCACCGC CGATGCTGGA ACGCTTGCGG GCAAAGAGGT GGTGTTCACC
GGCACGCTGC CGACGCTTTC TCGACGCCGC GCGACGGAGC TGGTCGAGGA AGCCGGTGGA
CGCGTGGCAG ACCGTGTCAC GGCGGCGACC TGGCGCCTCG TCGCGGGCCG GAACCCGGCA
TCGAAGCTGC ACCAGGCGAC CGCGCTGGGC GTCCCGGTGA TCGAAGAGGC CGAGCTCCTG
AGGCTCGCCG AGGCAGCGCC CGAGTAA
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| Protein sequence | MRPWFSSVAR RLALGASLGV VALTVIPNLS CAARSVSVAE TESLRRLELL RVEIARHDDL
YFRKAQPEIS DADYDALKQE LRELESRFGR RVPRDPAALR DMGDDRVSGF PKARHRMRML
SLEKTTTESG VRAFDQALRR LVKPPAEIAY VVEPKFDGLA ISATYEEGRL VRLVTRGNGE
EGDDVTAAAG RIRTLPPRLA GAAWPRVVEV RGEVFLTFAE FERINRGRRE NGRPTFSSPR
NLAVGTLKSL EPEDREVRQL DVVFFGLGAI DGHAAPASQT QLLEWIAQWG LPSVEDARRV
DSIDDAWRAV QELGGRRSHL AFPIDGAVIK LDDAVGQTAA GVSEVAPRWA IAFKYAPARV
GTRVRGVALQ VGRTGVITPV AELEPVALAG ARITRATLHN ASEMERSDLR VGDFVWIERM
GEIIPAVVAV DTAQRGTVSA PFVFPRDCPG CGALLVRALD DANWRCTNDD CPARQVRKVE
HYVSDEGVGI RGLGAASVEA LVRSQRVREI PDLYTLTAAE VTAHTRLSAA QAARVVDAIQ
RSRKAPLRRV IAGLGLPGIG PAGANALGAR FADLPQFAAA RESDLQQVEG LRPESVRALA
TALSAERTQQ LLARLAAAGV GAQSATADAG TLAGKEVVFT GTLPTLSRRR ATELVEEAGG
RVADRVTAAT WRLVAGRNPA SKLHQATALG VPVIEEAELL RLAEAAPE
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