Gene Oter_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_2005 
Symbol 
ID6205790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2575977 
End bp2578790 
Gene Length2814 bp 
Protein Length937 aa 
Translation table11 
GC content65% 
IMG OID641691655 
ProductUTP-GlnB uridylyltransferase, GlnD 
Protein accessionYP_001818888 
Protein GI182413822 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2844] UTP:GlnB (protein PII) uridylyltransferase 
TIGRFAM ID[TIGR01693] [Protein-PII] uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.572781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.260834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTTC CGACCCCCGT CGCACCTGAA GATCCTCTGG CGTTCACTGG CGCCGCCACG 
CGCGCGGAGC GGCTCGCCGC GTGCAAGACC TATCTCGCCA ACGAGAGACA CCTGCTCCAC
GAGCGGCACA AGGCCGGCGC CTCCGGCCTG GAGATTGTTC ACGCCTGGTC GGCTACGATC
GATCACATGC TGCTGCGCTT GTTCGACGCC GCCATGCTGA GCCACCTGCA GGCGACCGGC
GCCGCCAAGC CGCCCGTCGC CGTCGCCCTG ATCGCCCTCG GCGGCTATGG CCGCGGCGAA
CTCAGCCCGT TGAGCGATAT CGACGTGATG TTCCTCCTGC CGGCGAAAAC GAAGCCCGCC
GCGATCAAGC CGTTCCTCGA ACACCTCACC AACGAGATCC TCTACCCCCT CTGGGACTGC
AAACTGAAGG TCGGCCACTC GATCCGCAAC GTCGACGAGG TCTTCACCGA GGCCCGCAAG
GACATCCAGA CCCTCACCTC GCTGCTCGAG TCGCGCCTCG CCGCGGGCTC GACTTCGCTC
TACGAAACCT TCGAGCAGGC GTATCGCGCG TTCTCCACGA CCGAGGACCC GAAGGGCTAT
ATCGCCGCGC GGCTCGACGA TCAGGCCCAG CGCCGCGCCA AATACGGCGA CACCGTTTTC
CTGCAGGAAC CCGATCTGAA GAACGGCGTC GGCGGGCTGC GCGATTATCA GAACGCCGTG
TGGATGGCGC GCGTGAAGCT CGGGATCACC CAGATCGAGG AGCTCGCCAC CCAGAACTAC
CTTCGCCACG ACGAGCTCGC CGCGTTTACC CGCGCCTACG ACTTCCTGCT GCGGGTCCGT
AACGAGCTCC ACTTTATCAA TTCCCGCGCC ACCGACCTGC TCGATCTCGA CCACCAGCCG
CGCGTCGCGC GCCAGCTCGG CTACACCGAG GCCAACCTGC TCGTGCGCGT CGAGCACTTC
ATGCAGGATT ACTACCGGTC CGCCCAAACG ATCTTCCGGA TCTCGAAGCT AATCGAGAGC
CGGCTCGCGC TGACGATCGG TCGCGACGCC AAGGGCGGAA AGATTTCGAT CCGGGACAGC
CTGCTCGCCT CGCGCTTCCG CCGCACGAAG AAGATCGACG GCTTCGTCCT GCGCGGCAGC
GATCTCGCCG CGGAATCACC CGCCGTGTTC GAGCAAGACC CGGTCCGGCT GATTCGCGTG
TTCCGGCACC GGCAGCAGCT CGACTGCGAG CTGGACTTCA ATCTCGGCAC GCTGATCCGG
CAGTCGCTGC ACCTGCTGAC GCCCGACGTG CGCGCGTCGC AGGACGCCAA CGTGAGCTTC
CGCGCGATTC TGTCCGAGCC GGGCGCGGTG TTTCCCGCGC TGAACCTGAT GCACGAGCTC
GGCGTGCTGA ACAAATTTGT CCCCGAGTTC GCCGGGCTGA CCTGCCTGGT GCAGCATGAG
TTTTATCATC GCTACACCGC CGACGTGCAC ACGCTCGAGG CGGTCCGGCA GCTGGACCTG
ATCTTCACCG AAGCCGAACC GATCACCCTC AAATACCGGC AGGCGCTGCA CGAAACCTCC
GATCCGGCGC TGCTTTACCT GACGCTGCTG TTGCACGACA TCGGCAAGTC GGAAGGTATT
AAAGGCCACG CCGAGGCCGG GGCCGCGCTC GCCGCGCCGA TTCTGGAGCG GCTCGGCGTG
TCGCCCGAGG GCCGCGAACT CGTCACGTTC GTCATCAAGA ATCATCTGGT GATGGCACGA
TTCTGGCAGA AGCGGGACGT CGATGACCCC CAAACTGCCG CCGCTTTTGC CGAGATCGTG
GGCGATGCCG AGCGTCTGCG GAACCTGTAC GTCCACACGT TCTGCGATGC CCGCGGCACC
GCGGCCAGCT TGTGGAACAG CTACAAGGAC ACGTTGCACA CGCGCCTCTT CCTCGCCACT
TTGGAGCACC TGAACCTGGG CGAAGCCGTT CACGCCAACT ACGAAAAGAA GAAGCACATG
ACCCAACAGG AACTCATCGC CCGCACGATC CCGGGCGTCG CCACGGAAGA GATCGTCGCG
CATTTCGGCC TGCTTCCTGA CCGCTATTTC ATCCAGACCG AGCCCGACGA AATCTCGCTC
CACATCCGGA TGGTGCACCG GCTGCTCAAA TCGATCACCA CCGCCGACTC CGTCGGCTCG
CTCAAGCCGG TGATCGAATG GCAGGACGAC CTCAACCGAT CCCTCACCGT CGTCAATGTC
GTCACGTGGG ATCGCGCCGG CCTCTTCTAC AAACTCGCCG GCGCGTTCAG CGTCGCGGGA
CTGAGCATTC TCGGCGCGAA GATCATTTCG CGTTCGGATC ACATCGCCAT CGACACGTTC
TACGTCGTCG AGCCGGGCCG CGGCGTGGTG CAGAGCGCCG CGGCGCAGGA AGCCTTTGCG
CGCACCATCG AGGCGGCGCT CGTCTCGAAC AAGGATCTTT ATCCCGATAT CGTCGCGCAG
GCGAAGAAAC TCGCCGCCAG CCGCTACACC GGCGTCGTCA ACGGGGAGGC GCTGCACACC
GCGTTTCCGC CCACCGTCGA GGTGTATCAC GAACTCGCCA TGCAGCGCAC GATCGTCGAG
ATCCAGGCCC GCGATCAGAT CGGTCTGCTC TACCGGCTCG CCAAAATCAT TTCCGACCAA
GGCTTCGACA TCACGTTCGC GCGGATCGGC ACGGAGCGCG GCGTCGCGAT CGACACGTTC
TATATCGAGA GCTCCGAAGC GGGCCAACCG ATCGACACGC CGCGGCTGCA GGTTCTCCGC
GACGCGCTGA CCGAAGCGAT CAAGCCGGAA GCCGCCGCCG TCGCGACGGT ATGA
 
Protein sequence
MFVPTPVAPE DPLAFTGAAT RAERLAACKT YLANERHLLH ERHKAGASGL EIVHAWSATI 
DHMLLRLFDA AMLSHLQATG AAKPPVAVAL IALGGYGRGE LSPLSDIDVM FLLPAKTKPA
AIKPFLEHLT NEILYPLWDC KLKVGHSIRN VDEVFTEARK DIQTLTSLLE SRLAAGSTSL
YETFEQAYRA FSTTEDPKGY IAARLDDQAQ RRAKYGDTVF LQEPDLKNGV GGLRDYQNAV
WMARVKLGIT QIEELATQNY LRHDELAAFT RAYDFLLRVR NELHFINSRA TDLLDLDHQP
RVARQLGYTE ANLLVRVEHF MQDYYRSAQT IFRISKLIES RLALTIGRDA KGGKISIRDS
LLASRFRRTK KIDGFVLRGS DLAAESPAVF EQDPVRLIRV FRHRQQLDCE LDFNLGTLIR
QSLHLLTPDV RASQDANVSF RAILSEPGAV FPALNLMHEL GVLNKFVPEF AGLTCLVQHE
FYHRYTADVH TLEAVRQLDL IFTEAEPITL KYRQALHETS DPALLYLTLL LHDIGKSEGI
KGHAEAGAAL AAPILERLGV SPEGRELVTF VIKNHLVMAR FWQKRDVDDP QTAAAFAEIV
GDAERLRNLY VHTFCDARGT AASLWNSYKD TLHTRLFLAT LEHLNLGEAV HANYEKKKHM
TQQELIARTI PGVATEEIVA HFGLLPDRYF IQTEPDEISL HIRMVHRLLK SITTADSVGS
LKPVIEWQDD LNRSLTVVNV VTWDRAGLFY KLAGAFSVAG LSILGAKIIS RSDHIAIDTF
YVVEPGRGVV QSAAAQEAFA RTIEAALVSN KDLYPDIVAQ AKKLAASRYT GVVNGEALHT
AFPPTVEVYH ELAMQRTIVE IQARDQIGLL YRLAKIISDQ GFDITFARIG TERGVAIDTF
YIESSEAGQP IDTPRLQVLR DALTEAIKPE AAAVATV