| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1948 |
|---|
| Symbol | |
|---|
| ID | 6207752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 2443232 |
|---|
| End bp | 2444194 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641691596 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001818831 |
|---|
| Protein GI | 182413765 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTCTCA TCCTGACCAA CAAGCAGGAC GTTTCAGCTG ATTTTGTCGT GCGAGAGCTG
AGACGGCGAG GGGCTGCATA CGTCCGGGTG AACACCGAAG ATCTGCGAAC GGGTGAGTGC
AGCTTTCGGC TCTCACCTGC GCCCTCGGTG ACGATAGATC GCAATGGCTC TTCCGTAAAG
TCATCGGACA TTGGAGCAGT ATGGCATCGG CGCCCGGGCC ATGCTTTTGA TGAAGTGCCG
ACGCCGGAAC GCCCCGCACC AGATGAGGAG AAATTCGTCG TCGAACAATG GATGGTTTGG
ATCGAGGCGC TGGAGGTAGC GATCAGCGAT GGCTGGATGA ACCCACTCAC ACCTGCCTCA
CTGTTCGAAA ACAAGATTCG TCAGCTTTCG CTGGCCCGTC GAATTGGATT CACGATCCCC
GACACCATCG TTTCAAACTC ACCGTCTGCT ATAAAAAACT TTCGCCGCGA ACACCACGCG
GGTCTCGCGG CTAAGGCTCT CTATGCTCCA CTCTTGGAAG GGATTGATCG TGACCGCTTC
GTCTTCACCA GTCTCGTGGA ATCAGGTCAC CTTAATGACG CGGCAGCGTT ACGGCAGGCT
CCGACGATCT TCCAAGAAGC GCTGATCCCA AAGGTCGATT ACCGGGTCAC CATCGTCGGG
ACGAAAATTT TCGCGGTGAA AGTATGTTAC CCACCCCAAG ACGGCATCGA TTGGCGGGTT
AGCAAAGCGG CGGTGCAATT CGTCCCTATT GAGCTTCCCG CAGAGATCGC GGGGATGTGC
CTTAAATTCG TGCAGAATGC GGGGCTCGTT TTCGGGGCCA TCGACCTTAT CGAATCTCGA
GGCGAATGGT ATTTCATTGA AATCAATCCG TCGGGTGAAT GGGGCTGGCT ACAACAGCCG
GTCGGCCTTC CGATCGCAGA GGCGATTTGC GACACGCTCC AAGCTTTGGA CACCACCCGA
TGA
|
|---|
| Protein sequence | MILILTNKQD VSADFVVREL RRRGAAYVRV NTEDLRTGEC SFRLSPAPSV TIDRNGSSVK
SSDIGAVWHR RPGHAFDEVP TPERPAPDEE KFVVEQWMVW IEALEVAISD GWMNPLTPAS
LFENKIRQLS LARRIGFTIP DTIVSNSPSA IKNFRREHHA GLAAKALYAP LLEGIDRDRF
VFTSLVESGH LNDAAALRQA PTIFQEALIP KVDYRVTIVG TKIFAVKVCY PPQDGIDWRV
SKAAVQFVPI ELPAEIAGMC LKFVQNAGLV FGAIDLIESR GEWYFIEINP SGEWGWLQQP
VGLPIAEAIC DTLQALDTTR
|
|---|
| |