Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1898 |
Symbol | |
ID | 6206157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2381302 |
End bp | 2383728 |
Gene Length | 2427 bp |
Protein Length | 808 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641691546 |
Product | permease |
Protein accession | YP_001818781 |
Protein GI | 182413715 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCG TCTTTCGCTC CCTCCTGAAG TCCCCCGGCT TCACGACGAT CGCGCTGCTC ACGCTCGCCC TGGGCATCGG CGTGAACACC GCCATGTTCG GCTTGGTCAA CACGCTTCTG TTCAAGGCCG CGCCTTACCC CGACGCCGAA CGTCTCGTTC GCATCTTTCG CACCTCGCCG CAATCGCAGA CCTGGCCGCA CTCCGCCGCC GAGCTCGTCG ATTTGCGCGC GCAGGCCGGC TCGCTCGAAC GCTTCACGTA TTTCCGCTGG CACACGTTCA GTTTTGCCGA ACCCGGCCAG CCCGCGGAAC GCATCGCCGG GCTCGCCGTG GCGGCGGACT TCTTCAAAAC CCTCGGTGTT CAGCCCGCGC TCGGTCGCAG TTTCAGTGCC GAGGAACTCA CGCCCGGCAA GGATCAGGTC ATCGTGCTCA GCCATGGTCT GTGGCAGCGC CGCTTCGGCG GCGATCCCAC CATCGTGGGT CGCACGCTTC GGATCGACGG CCAGGACGTC ACGGTCATCG GCGTCATGCC CGCCGGCGTC GAATACCCGA TGCTCTGGGG CCGCATCGAC GCGTGGCGGC CGCTCGCGCT CACGACCGAG CAACTCCAGA ACCGCGGCAA TCATTACCTC AACGCGCTCG GCCGTCTCCG GACCACCACA TCGCTCCGCC AGGCGCAGGC CGAGTTCGAC ACGATCGCCG CACGTTGGGC GAAGGATTTC CCGGATGTCA GCTCCGGCGC GGGACTGCGG CTGGTGGTGC TGCACGAGTC CACGATGGAC CAAGTCGGCC GCAGCCTGTC GCTGACGGTG ATGGGCCTCG CCGGGTTCGT GCTGCTCATC GCCTGCGCCA ACCTGGCCAA TCTCCAACTC GCGCGTACGG CCAGTCGCGC GCGCGAGTAT GCGATCCGCG CTGCGCTCGG CGCCTCGCGC CGGCGGCTGA TCGGCGAATT GCTGCTCGAG AGCGTCGTGC TCTCGCTCGC CGGCGGCGCC CTCGGTTTCG TCCTCGCCCA ATGGGTCAAC GATTTCCTCG GCCGTCAGAT CCGGATCGGC GATGAACTCG GGCTCGCCAT CTCGCTCGAC CTGCCGGTTT TCGTGTTCGC TTTGCTCGTC TCTCTCGCGG CCGGCCTGCT CTTCGGCGTG CTACCCGCGT GGACCGCCTC GCGAGCCGAC GTAAACGCCA CGCTCAAGCA GCAAGGTCGC GGCTCCACCG GCGATCGCTC GCAACACCGG CTGCGCCACG GCCTGATCGT CGCCGAGGTC GCGCTCGCGC TGTCGCTGCT CGCCGCCGCC GGCTTCTTCG TGCGCGGAGT CCAGCGCTTC AGCGGACTGG ATATGGGCTG GAACCGCGCC GGCGTCCTCA CCGCCACGCT CAACCTGCCC GATTCGAACT ACGGCAAGGA TGACCAGAAG CGCGCGTTCT ACCCGCAGGC GCTCGAGCGG CTCGCCGCCT TGCCGGGCGT CGAACATGCC GCCCTGTCCT CGTCCCTGCC GATCTGGGGC TACAACAGCT CACGCGACGT CGTCCCCGAG GGCCGGCCGC TGCCACCGCC CAGCGCGGTT CCGCTGGCCT ACTACGTCGC CGTCACCGCG GATTTCTTCC GCGTGCTCGA GGTTCCGCTC GTGCAGGGTC ATGATTTCTC CACCAACGTC CGCGCCGACA ACCCACGCGT GGCCATCGTC AACGAGACGC TCGCACGCCA GTTCTGGCCG GGCGAAAATC CGATCGGCAA ACGCATCGGC AGCTCCGACC CCGACAACAA GGAGTGGTGG GAAGTCATCG GCGTCGTACG CGACGTCGGT TTCGCCGGCA GCCTGTCGGC GCCCGACACG CGGCTGCAGG TCTACGTGCC GCTCGTGCAG GAGCCGTGGA ACTATCTCTC CATCGCGCTG AAATTCTCCG ACAGCGCCGC CGCCACCGCC ACCTCCACGG CGATGGCCAA CAGTCTCCGC CAGGCCATCG CGGGGATTGA TCCCGATTTG CCTGCCTACA ACATCCGCAC CATCGAACAG GCCATCGAGC GCATCGCCCG CAATATCCTG CTCGCGAACC AACTCCTGGT GGGCTTCGCG TTGCTCGGCC TGCTGCTCGC CGCGATCGGC CTCTACGGCG TGATCTCCAA CCTAGTCGTG CAACGCACGC CGGAATTCGG CATTCGGATC GCGCTCGGCG CGCAGGCCCG CGACGTTCTC TGGCTCGTTC TCGGCAAGGG CGCGCAGCTC GCCGCGCTCG GCACCGCGCT CGGCCTGCTC GGCAGCTTCG TCCTGCTGCG CCTCTTCGCC GCGGTGATTC CGGCTCTGCC CGGCCAGGAC TATCTCCTGC TCGCCGGCAC CGTCGTCCTG CTGCTCGCCG TCGCCTTGTT CGCGTGCTGG ATCCCCGCGC GCCGCGCCAC CCGTGTGAAC CCGCTCGAGG CCCTTCGCGC CGAATAG
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Protein sequence | MKFVFRSLLK SPGFTTIALL TLALGIGVNT AMFGLVNTLL FKAAPYPDAE RLVRIFRTSP QSQTWPHSAA ELVDLRAQAG SLERFTYFRW HTFSFAEPGQ PAERIAGLAV AADFFKTLGV QPALGRSFSA EELTPGKDQV IVLSHGLWQR RFGGDPTIVG RTLRIDGQDV TVIGVMPAGV EYPMLWGRID AWRPLALTTE QLQNRGNHYL NALGRLRTTT SLRQAQAEFD TIAARWAKDF PDVSSGAGLR LVVLHESTMD QVGRSLSLTV MGLAGFVLLI ACANLANLQL ARTASRAREY AIRAALGASR RRLIGELLLE SVVLSLAGGA LGFVLAQWVN DFLGRQIRIG DELGLAISLD LPVFVFALLV SLAAGLLFGV LPAWTASRAD VNATLKQQGR GSTGDRSQHR LRHGLIVAEV ALALSLLAAA GFFVRGVQRF SGLDMGWNRA GVLTATLNLP DSNYGKDDQK RAFYPQALER LAALPGVEHA ALSSSLPIWG YNSSRDVVPE GRPLPPPSAV PLAYYVAVTA DFFRVLEVPL VQGHDFSTNV RADNPRVAIV NETLARQFWP GENPIGKRIG SSDPDNKEWW EVIGVVRDVG FAGSLSAPDT RLQVYVPLVQ EPWNYLSIAL KFSDSAAATA TSTAMANSLR QAIAGIDPDL PAYNIRTIEQ AIERIARNIL LANQLLVGFA LLGLLLAAIG LYGVISNLVV QRTPEFGIRI ALGAQARDVL WLVLGKGAQL AALGTALGLL GSFVLLRLFA AVIPALPGQD YLLLAGTVVL LLAVALFACW IPARRATRVN PLEALRAE
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