Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1812 |
Symbol | |
ID | 6207502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 2253629 |
End bp | 2254465 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641691461 |
Product | hypothetical protein |
Protein accession | YP_001818696 |
Protein GI | 182413630 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.515033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.569986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGAAT ACGGCTACTC CCAGGAACAC CAGCCGCTCA CGTGGTGGCG CGGTCACGCG ATCTATGCGG CGCACGTGCT CGTGCTCATC TGGGCGGGCG CGATGCTGAT CACGGCCATT TTGATGTGGT CCGGCGCCTA CGGCGTACTC GGTCTCTTGC CGTTCAGCAG CGAACGCGTG CTCGCCGGCG AGGCTTGGCG GATCTTCAGC TACGGTTTCT ACAATCCGCC GAGCCTCTGG TTCGTGATCG AGATGGCGAT GATCATCTGG TTCGGCCGCG AGGTGGAGCG GTTCTTCGGC CGAAAGGTGT TTCTCGAGTT TTACGTCGGC CTCTACCTGT TCCTGCCGCT GCTGTTCACC GCGATCGGCC TGTGGCGGCC CGTGTCGCTC TCGGGCGAAT CGGGCGCGTT CGGGTTGTTC CTCGCGTTCG CCACGCTCCA TCCGAGCGTG CCGGTGTTTT TCAACCTCCA GGCCAAGCAC ATCGCGTTCG TGCTCGTCGG CATCTACACG CTGATCGGAT TCAGCCGGAA TGACGTGAAC TCGCTCCTCG CGCTCTGGGC GACCGTGGGG TTCTCCTACG CGTTCGTTCG TCATGAGCAG GGGCGGTTCT CGCTGCCGAA GCTACGCTGG CCCACGCGCC GGCCGAAATT GCGCGTGCTG CCCGGGGGCG ATCGCCGCGG CAGCAATCCC CGCAGTTCGT CCGACCCTGC CATGGCCGAG CTCGATGCGC TGCTCGACAA GATCGCCCGG TCCGGACTCG ACAGCCTGAC CGCGCAGGAG CGGATCAAGC TCGATCAGGG TCGCGAGGCG TTGCGCCGCC GCAGTTCGGG CCGCTGA
|
Protein sequence | MDEYGYSQEH QPLTWWRGHA IYAAHVLVLI WAGAMLITAI LMWSGAYGVL GLLPFSSERV LAGEAWRIFS YGFYNPPSLW FVIEMAMIIW FGREVERFFG RKVFLEFYVG LYLFLPLLFT AIGLWRPVSL SGESGAFGLF LAFATLHPSV PVFFNLQAKH IAFVLVGIYT LIGFSRNDVN SLLALWATVG FSYAFVRHEQ GRFSLPKLRW PTRRPKLRVL PGGDRRGSNP RSSSDPAMAE LDALLDKIAR SGLDSLTAQE RIKLDQGREA LRRRSSGR
|
| |