| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1806 |
|---|
| Symbol | |
|---|
| ID | 6208628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 2244418 |
|---|
| End bp | 2245122 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641691455 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001818690 |
|---|
| Protein GI | 182413624 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.179898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.20864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAGA TTTCCGGCCT CAGCAAACGC TTCCGCTCGC GCGCGGTGTT GCAGCGGCTC
GATCTCACGG TCCGTCCCGG CGCAGTCAAC CTGCTGGTGG GCGCCAACGG CGCCGGCAAG
ACCACCTTGC TGCGGATCAT CGCGCAACTG GCTGCTCCCG ACGCGGGGAC GGTGCGGATC
AACGGGCTCG ACCTCGGGAC GGAGCCGTTG CGGGCCTTGG CGCAGCTATC GTTTCTGCCC
CAGGCGCCAC GGTTTCACCC GCGGCTCACC ACGCGGCAAG TGGCGCAGTA TTACGGGCGG
TTGCGGCGAC GGGAGCCGTC CGCGGTGGAC GCGGAACTCG CGCGCTGGCA GCTGACCGAC
CACCTCCAGG TAATGACGCA TCAACTTTCC GGCGGCATGC GGCAGCGGCT GGCGCTCGCG
GTCTTTGCGC TGGCGCACGC GCCCGTGCTG GTGCTCGACG AGCCCGGCCT GAGCTTGGAT
CCGTTCTGGC GTGAACAACT GCAGCAGTTT CTGACCGACG CGGCGCGCGA GGGCCGCACC
GTGCTGGTGG CGACCCATCT GCTCGGCGAG TGGGAGGGGC GCGTCGACGC GTGCCACCAC
ATGCAGGCGG GCCGGATCGT CGGCGAGTTG CCTCCGGCGC GACTGCGCGC CGCCTTCGCG
GAGGCCGAGG GGCTGCCGTT GCCCGATCGG GAGGGCATCG AATGA
|
|---|
| Protein sequence | MIEISGLSKR FRSRAVLQRL DLTVRPGAVN LLVGANGAGK TTLLRIIAQL AAPDAGTVRI
NGLDLGTEPL RALAQLSFLP QAPRFHPRLT TRQVAQYYGR LRRREPSAVD AELARWQLTD
HLQVMTHQLS GGMRQRLALA VFALAHAPVL VLDEPGLSLD PFWREQLQQF LTDAAREGRT
VLVATHLLGE WEGRVDACHH MQAGRIVGEL PPARLRAAFA EAEGLPLPDR EGIE
|
|---|
| |