| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1731 |
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| Symbol | |
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| ID | 6205165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 2130138 |
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| End bp | 2130722 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641691379 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001818615 |
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| Protein GI | 182413549 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0266504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACCT CGAGCGCGAT CACCGACGCA CTGCTGGCGC AGCGTGGCGT CTTCAAAGCG
TTCCTCGTCT CGCGGCTCGG CAACGCGTCC GATGCGGAGG ATGTGTTGCA GTCGAGCCTG
CTGAAGGCCT GGCAACACGG CGGCGAACTA CGCGACGAGG CGCGGGTGTC CGCCTGGTTC
TATGGCATCC TGCGGCATGC GGTCGTCGAT CACCTGCGAC AGCGCAATGC GGCTGCGGCG
CGGGAGCAGA GTTGGTCGAC AGATCCCGCG CTCGCCCTGA CCTCCGACGC CGCGGCCGCA
AAGGCGCTTT GCCGGTGCTT CGAGCCGCTG CTCGCCACGC TTAAACCACG GCACGCGGAA
CTGCTGCGGC GCGTCGAGTT CGAAGACCAG CCCGTGGCCG CGGTCGCGGC CGCGCTTGGC
CTCTCGACCA ACGCGGCCAG CGTCACACTC CACCGCGCCC GGGGTGAACT GCGCGAACGC
CTCGAGGCCT TCTGCGGCGC CTGCGCGAGC GGCGCGTGCC TCGACTGCGA TTGTCCGCCG
TCGTCGCGTG TCGCAACCTC CAGGCGAGTT TCACGTGTCA CGTGA
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| Protein sequence | MTTSSAITDA LLAQRGVFKA FLVSRLGNAS DAEDVLQSSL LKAWQHGGEL RDEARVSAWF
YGILRHAVVD HLRQRNAAAA REQSWSTDPA LALTSDAAAA KALCRCFEPL LATLKPRHAE
LLRRVEFEDQ PVAAVAAALG LSTNAASVTL HRARGELRER LEAFCGACAS GACLDCDCPP
SSRVATSRRV SRVT
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