| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1717 |
|---|
| Symbol | |
|---|
| ID | 6204656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 2106122 |
|---|
| End bp | 2107465 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641691365 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001818601 |
|---|
| Protein GI | 182413535 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.873938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.15988 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG TGGCGCCTAG TTTCGGCGCG GCGGAATCGT CACCGGAGCG CGCGCCCGCC
GCCTCCGCGC GCCGGACACC GCGCTGGTCC GACGGGGCCG AGCGGGAATT CGCCGCCGAA
GTCACCGTGC TGAACCTGCG CCGCTGCCGG ATCGCCGCCA TCGCCGGCAT GATGATCATC
GTGTGGAGCA CGCTGCTCAG CCTGATGCTG CCGGAGCTGC AGTTCGCCGA CCTGCAGGCG
TGGTTTGGCG CGTGCTTCGC CCTTTACGCA CTGCTACTGG CGGTGCGGAC GTGGGTGATC
CGGCCGACGG TCCCGCCGTG GTGGCGTGAG GCCTATGTGC TCGTGTTCGT CGTGGCGCTG
ATCGGGATCT GCGACGGGTT CTTCTATGTG CTTTCGCAGC AGCTGACGGC GGTGTCGGCG
TTCTCGCGCG GCATGCTGGT GACGGCAGTT ATTTTCGTGC TGCCGCCGCG CCGTTATCTC
CCGTTCGTGG CCGCGAACGA GCTTTTGCTT TGCGCGTGGG TCGCGTGGCG CGGCGTGCGC
GTGGACACGC TCACGGCGTT TCTCGACGGG ACGGCGGGTG CGGTCGTGGG CGCGGTGATC
TCGTGGGTGC TCTATTCTGC GAAACGCGCG GACTTCGTGC ACCAGCAGCA AATCCGCCGG
CAGCATACGG AGATGAACGA GCTCATGGCG ATCACCGCGC ACGATCTGCG GAGTCCGTTG
TTCAGTTTGA ACAATCTGCT CGCGCTGGCG TTATCCCGCG CGGGACTTGA TCGCAGCCGG
TTGCTGGAGG TGATCGCGGA TGCGGCGCGC GCGTGCGATC GAATGCTCGA GCTGGTCAGC
GGGCTGATCG CGGCGCATGC GGTCGAAGGA AAACCTAATG CGCCGGTCGC GGTTGGCGAC
TTGCGTGGGC CGATCGGCGC GGCCGTGGTC CGGCTGCAGC CGCTGGCGGC AGCGCGAGGA
TTGGACCTGC GGCTCGAGTT ACCGGCCACC GCCGCGGACG CGCGATTTCA TGAGGCCGCG
GTGATCCAGA TCATCGACAA CCTGGTCGGC AACGCGCTGA AATTCACGCC CGCGGGTGGG
ACTGTGGCCG TGAACCTGCG GCCCGGTGCG CGAGCGTGGA CGCTCGAGGT GAGCGACGAA
GGCCCCGGCG TGCCGCTGGA CGAGCAGCCG CGGTTGTTTC AGAAATACGC GCGCGGCAGC
GTGCCGGCAA CGCAGGGCGA ACCCAGCACG GGACTCGGGC TGTTCATCGT GCGCACGCTC
GCCGAGCGGA TGGGGGCCAC CGTGAGCTAC ACGCCGCGTG TGCCGCACGG CGCGGTGTTC
ACCGTGGTGT GGCCGCAAGC CTGA
|
|---|
| Protein sequence | MSSVAPSFGA AESSPERAPA ASARRTPRWS DGAEREFAAE VTVLNLRRCR IAAIAGMMII
VWSTLLSLML PELQFADLQA WFGACFALYA LLLAVRTWVI RPTVPPWWRE AYVLVFVVAL
IGICDGFFYV LSQQLTAVSA FSRGMLVTAV IFVLPPRRYL PFVAANELLL CAWVAWRGVR
VDTLTAFLDG TAGAVVGAVI SWVLYSAKRA DFVHQQQIRR QHTEMNELMA ITAHDLRSPL
FSLNNLLALA LSRAGLDRSR LLEVIADAAR ACDRMLELVS GLIAAHAVEG KPNAPVAVGD
LRGPIGAAVV RLQPLAAARG LDLRLELPAT AADARFHEAA VIQIIDNLVG NALKFTPAGG
TVAVNLRPGA RAWTLEVSDE GPGVPLDEQP RLFQKYARGS VPATQGEPST GLGLFIVRTL
AERMGATVSY TPRVPHGAVF TVVWPQA
|
|---|
| |