| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1671 |
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| Symbol | |
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| ID | 6206502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 2044503 |
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| End bp | 2046284 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641691313 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_001818555 |
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| Protein GI | 182413489 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0302135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATATCT CGCTGCTTGC TCCCGTGCTT GCAGTCGCTG GCGGCAGCCC TGCCGTCACC
GGCGGCAATC CTGTCCACCT GCAACTCGCC TGGGTCGACT ACCTGATCCT CGGGCTTTAT
TTCGTCTTCG TTCTGGGGAT CGGTTGGATT CTCCGGAAAT ACATCAAGAC GAGCTCGGAC
TTTTTCGAAT CGGGCCGTTC GCTGCCGGCG TGGATTTGCG CGCTGGGATT TATCGGCGCC
AACCTCGGCG CACAGGAGGT GATGGGCATG GCGGCGTCGG GCGCGAAATA CGGCATCGCC
ACCAGCCACT TTTACTGGGT CGGCGCCATT CCCGCGATGG TCTTCGTCGG CATTTTCATG
ATGCCGTTCT ACTACGGCTC GAAGGCGCGC TCGGTCCCCG AATACCTGAA GCTCCGGTTC
GACGAGAAGA CCCGCGTGTT CAACGCGGCG TCGTTCGCGT TCATGACGGT GTTCTCGTCC
GGCATCTCGA TGCACGCGCT GGCGCTGCTG CTGCAGGCGG TGCTCGGTTG GAACTACGAT
CTGTGCATTG TGCTCTCGAG CGCGATCGTG TTGATCTACA TCTACACGGG CGGGCTGACC
TCGGCGATCT ACAACGAGGT GCTACAGTTC TTCCTGATCG TGCTCGGTTT CCTTCCCTTG
GTGCTGCTCG GGCTGAACGA CATTGGCGGT TGGGACGGCC TGATGACGCA GCTGAACGGA
TACTCCGCCG ACAAGGGCAT GCCCGGCGCG TGGAGCCATT CGTGGGCGCA CATGGGCGAC
GCGACGGCGA ATCCGATGGG CGTCGAGTGG TTCGGGCTGA TCATGGGCCT CGGGTTCGTG
CTCTCGTTTG GCTACTGGTG TACGGATTTC CTGGTAATTC AACGCGCCAT GGCCGCCAAG
GACATGAATG CGGCGCGGCG CACGCCCTTG ATCGCGGCGA TCCCGAAGAT GTTCTTCCCC
GCGCTGGTGA TCCTGCCGGG CATGCTGGCG ATCGCGCTCT TCCACAAGGG CGGAACGGAT
CTGGCCTTGC CGGTGGACGC GAACGGAACA CCGGACTACA ACATGGTGGT GCCGGCGATG
CTCGCGAAGT ATTTCCCGAA CGGGCTGCTC GGCGTCGGGC TGACGGCGTT GATGGCTTCG
TTCATGTCCG GCATGGCTGG CAACGTGACC GCGTTCAACA CGGTGTGGAC CTACGATCTT
TATCAGGGAC ACATCAACAA AAGCGCATCC GACGCCCACC TCGTGAAGGT GGGTCGGATC
ACGACGGTGG TCGGGCTTCT GATCAGCGCA GCGTGTGCTT ATCTTGCGCG GCAGTTCAAC
AACATCATGG ACATGCTGCA GCTGGTCTTC GGATTCGTGA ACGCGCCGCT GTTCGCGATC
TTTCTGCTCG GTATGTTCTG GCGCCGGGCC ACGGGCCACG GCTCGTTCTT CGGTCTGCTG
ATTGGCACGG TGTCGGCGAT GATCTTCCAC GGTCTCACGC TGCCAGTGGG CGAGGCGGTC
GGCATCAAGG GCGGCTGGAT TTCGGTCCAA GGGACGTTCA CCAGCTCGAT GGCGCAAAAC
TTCTGGATGG CGATCTGCGC GTTCGTCGGC TGCTTCGTTG CCACGGCCGC GATCTCACTG
GCGACCAAAC CGAACCGGAC CGACGACGAA CTGCGAGGGC TGGTCTATTC GCTCACCGAG
AAGCCCAAGG ACGAGCACGG CGCGCCATGG TATGCTAAAC CGATGGCTCT CGGTGCGCTG
GTGCTCGCGG CGACGCTCGT GCTCAACATC ATCTTCTGGT AA
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| Protein sequence | MHISLLAPVL AVAGGSPAVT GGNPVHLQLA WVDYLILGLY FVFVLGIGWI LRKYIKTSSD
FFESGRSLPA WICALGFIGA NLGAQEVMGM AASGAKYGIA TSHFYWVGAI PAMVFVGIFM
MPFYYGSKAR SVPEYLKLRF DEKTRVFNAA SFAFMTVFSS GISMHALALL LQAVLGWNYD
LCIVLSSAIV LIYIYTGGLT SAIYNEVLQF FLIVLGFLPL VLLGLNDIGG WDGLMTQLNG
YSADKGMPGA WSHSWAHMGD ATANPMGVEW FGLIMGLGFV LSFGYWCTDF LVIQRAMAAK
DMNAARRTPL IAAIPKMFFP ALVILPGMLA IALFHKGGTD LALPVDANGT PDYNMVVPAM
LAKYFPNGLL GVGLTALMAS FMSGMAGNVT AFNTVWTYDL YQGHINKSAS DAHLVKVGRI
TTVVGLLISA ACAYLARQFN NIMDMLQLVF GFVNAPLFAI FLLGMFWRRA TGHGSFFGLL
IGTVSAMIFH GLTLPVGEAV GIKGGWISVQ GTFTSSMAQN FWMAICAFVG CFVATAAISL
ATKPNRTDDE LRGLVYSLTE KPKDEHGAPW YAKPMALGAL VLAATLVLNI IFW
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