| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1621 |
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| Symbol | |
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| ID | 6208095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1991210 |
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| End bp | 1992970 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691263 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001818505 |
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| Protein GI | 182413439 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.143192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGC TGTCCACGGA TCTCCTGCCC TCCTCGCTGA CCGCCCAGCT CAGCGAATCC
CAACGCCAGG CCGTCGCCGA GGCGCCGCGC GACAAACGGC TGACTGTTCT GGCGGGCGCG
TTGAACCTGC CGGAACCCGC GGCGCTCTCC GCGCTGGCGT CCGCCTCCGG ACTCGATGTC
GCCAGCAATC TCGAGGCCGA CCCCGCCTCC CGCGGATTGC TGCCCGCGCG GCTGGTGCAC
GACTTTCAGA TCATCCCGAT CAAGTTCGGT GCCGAGAGTC CAGAGTCCAG AGCTGAGAGC
CCGAGCCTCG ATGATTCTGG CTCTCAGCTC TCAGCTCTGG ACTCTCAGCA TCCCCTTCAC
CTCGCCACCT CGTGGCTGCC GGACGACGTC ATGGTCGACT GGCTGCGCAC GTTCACGCCG
CGCCGTCCGG TGTGGCACCT CGCCGTGCCC GAGCGAGTCC GCCAGCTGAT CATCGAGAAC
TACGGCGTGG GCTCCGGCTC GCTCGAGGAC GGCGACGACG GCTACGTCGC GCCCGAGGTC
GTGCAACAGG CCGAGGAAGT CGTCGACGAG GAGGCCGCGG TGGTGCGCTT CGTCAGCGAC
GTGATTGCGC AGGCGGTCGA GGACCAGGCG ACCGACATTC ACTTCGAGCC ACAGGAAGGC
CAGCTCCGGA TCCGCTACCG CGTCGATGGG TTGCTCGTGC CGGTGCCCGT GCCGGAGAAC
CTGCTGCGGT TTCAGGACGC GATCATCTCG CGCCTGAAGA TCATGGCGCG GCTCAACATT
TCCGAGCGCC GGCTGCCCCA GGATGGCCGC ATCAATTTCC GCGCCGAGAA CACCGTCCTC
GACATCCGCG TCTCCACGAT TCCGACCATC TACGCCGAGT CCGTCTCGCT CCGTCTGCTC
AACCAGAAGA AGGAGGCCTA CTCGATGGAC CGACTGGGGA TGAGCGCCGA GGAGCAGGCG
CAGATCTCGC AGGTGCTCGA TTACCCGCAC GGGATCATCC TCGTCACCGG TCCCACCGGC
TCCGGCAAGA GCACTTCGCT CAACGCGTTT CTCCGGAAGA TCAACTCCAC CGACCTGCGG
ATCATCACGA TCGAAGACCC GATCGAGTAT GAGGTGCCCG GCGTGAACCA GATGCAGGTC
CGGCCGGAGA TCGGGCTGAC CTTCGCCGAT GCGCTCCGCC ACGTGCTCCG TCAGGACCCC
GACGTGATCA TGGTCGGCGA AATCCGCGAC AAGGACACCG CCGAGATCGC GATTCGCGCT
TCGCTCACGG GCCACTTGGT TTTCTCGACA CTGCACACGA ACGACGCGCC CGGCGCGATC
ACGCGGCTCG TCGACATGGG CATCGAGCCG TTCCTCGTTG CGTCAGCTAT CGAGCTGGTG
ATCGCACAAC GACTCGTCCG CCGGCTTTGC CCCGTGTGCT CACGCGACGA GCCCGCAAAC
AAGATCAAGC TGCGTGAAAG CCTCTCGATC CTCGGCTGTC CAGCCGAGGA GGCCGACACG
GTCGAGGCGC TCAAGGCGCC GGTCGGCTGT GACCGTTGCC GCGGCACCGG CTACCGCGGT
CGGATCGGGT TGTTCGAGAT TTTCCGGCTC AACGACGAGA TGCACGAGCT GGTGTTGAAG
CGCGAAAGCA CCCGTACGCT GGACGAATGC GCGCGCCGTC ACGGTATGCG CACGCTTGGC
CAGAGCGGCT GGGAAAAGGT GAAGGCCGGC TACACCACGC TCGACGAGGT CCTGCGCGTC
GTCACGGTCG CCGAGAAATA G
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| Protein sequence | MPALSTDLLP SSLTAQLSES QRQAVAEAPR DKRLTVLAGA LNLPEPAALS ALASASGLDV
ASNLEADPAS RGLLPARLVH DFQIIPIKFG AESPESRAES PSLDDSGSQL SALDSQHPLH
LATSWLPDDV MVDWLRTFTP RRPVWHLAVP ERVRQLIIEN YGVGSGSLED GDDGYVAPEV
VQQAEEVVDE EAAVVRFVSD VIAQAVEDQA TDIHFEPQEG QLRIRYRVDG LLVPVPVPEN
LLRFQDAIIS RLKIMARLNI SERRLPQDGR INFRAENTVL DIRVSTIPTI YAESVSLRLL
NQKKEAYSMD RLGMSAEEQA QISQVLDYPH GIILVTGPTG SGKSTSLNAF LRKINSTDLR
IITIEDPIEY EVPGVNQMQV RPEIGLTFAD ALRHVLRQDP DVIMVGEIRD KDTAEIAIRA
SLTGHLVFST LHTNDAPGAI TRLVDMGIEP FLVASAIELV IAQRLVRRLC PVCSRDEPAN
KIKLRESLSI LGCPAEEADT VEALKAPVGC DRCRGTGYRG RIGLFEIFRL NDEMHELVLK
RESTRTLDEC ARRHGMRTLG QSGWEKVKAG YTTLDEVLRV VTVAEK
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