Gene Oter_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1523 
Symbol 
ID6205720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp1888440 
End bp1889177 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID641691164 
Productsignal peptidase I 
Protein accessionYP_001818407 
Protein GI182413341 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGC GCGGTGACTC ACGGCAAGGT GCGCACATGA CACCGAAGAG CCGCTTCCTT 
CATGCACTCT GGACCGAATG GATCCGCCCG CTCGCGTTGC CGGTGATCGG CATCCTGTGC
GCCAAGTCCG CGCTGGCCGA TATCAACTTC GTGCCCAGCG GCTCGATGCA GCCGACCGTG
CTGGAGGGCG ACGTCGTGTT CGTGAACAAG CTCGCCTACG ACCTGAAGGT GCCGTTCACC
ACGACCCACC TCGCCACTTG GGCAGCACCG CAGCGCGGCG ACATCGTCGT CTGCTTTTCA
CCCGAAGACG GCACGCGGCT GCTCAAACGC GTCGCCGCCC TGCCCGGCGA CATGATCGAA
ATGCGTGCGG AACGGCTCTA CCTCAACGGG TCCCCGCTGA GCTACGCGCC GCTTCCGACC
GACGCCGCGG GGATTTCGCA CCTCGCCGCC CAGGAACGCG CGGCCGCGTT CTTCGCCCGC
GAAGATCTGA GCGGTCGCTC GCACGCGCTG ATGGTCCTGC CCCGCCGGAG TGCGCTGCGC
AACTTCGGTC CGATCACGGT GCCGGCCGGC CGCTACTTCA TGCTCGGTGA CAATCGCGAC
AACAGCCACG ACTCGCGCTT CTTCGGCTTC GTGCCGCGCG CCCAGATCGT CGGCGAGGCC
AAGGGCGTGT TCGTGTCGTT CGATCTGAAC CGCTGGGCCC AGCCGCGGTT CGACCGGTTC
TTCGCAGCGC TGGAGTAA
 
Protein sequence
MAARGDSRQG AHMTPKSRFL HALWTEWIRP LALPVIGILC AKSALADINF VPSGSMQPTV 
LEGDVVFVNK LAYDLKVPFT TTHLATWAAP QRGDIVVCFS PEDGTRLLKR VAALPGDMIE
MRAERLYLNG SPLSYAPLPT DAAGISHLAA QERAAAFFAR EDLSGRSHAL MVLPRRSALR
NFGPITVPAG RYFMLGDNRD NSHDSRFFGF VPRAQIVGEA KGVFVSFDLN RWAQPRFDRF
FAALE