| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1472 |
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| Symbol | |
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| ID | 6205492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1835434 |
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| End bp | 1837248 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641691113 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001818356 |
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| Protein GI | 182413290 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.577642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA AGAACACTGT CATCGGCGTC CTGCTGCTCC TCGCCGCATT CGCCAGCCTT
TACCTCGGCC AGCGACTTTC GCCGCAGCGA AGCGCACAAC CCACTCCGAC GATCAGCACG
CCCCAGACCG CGGCCACCGG CACCGCGCCG GCGAACGCCC TGCCGACGGG CACGCCGTCC
GCGCCCGTGC CGTCGACGGC GTTCGCCTCG GTCGCGGAGA ACGATGGCTC CGCCACGACC
GTCACCCTGC AGAATGATTT CATCGCGGCC CACGTCACGG ATTTCGGCGG CGCGCTGCAC
GATGTCGCGC TGAAGAAATA TCCTGCGGAG CGGGATCGGC CGGAGCCGTT CGTCTTTAAC
GCGCTGCACG CCGACCCGAT GCTGGCGCTC GTCGATTTCC CCGGGCTCGA CCGGCAAACG
CGTTTCGAAC TCGTTTCGCA TACGCCGACG TCGGCGGTTT ATCGCGCCGT GCTGAACGGC
CAGGTCGAGG TCACGCGGCA CTACTCTGTT CTGCAGGCCG GCGACAAGTC CGGCGATCCC
TACGTCGTGC GCCACGAGAC CACGTTCCGC AACCTGAGCG ATCAGACGGT GACGCTGCCG
CGGGTCGCGC TGAGCCTCGG CACCGCCGCG CCGACGGATG CCAACGATCC GGGCATCCGG
CTCACCACCG GCTACTCGAA TGGCGACGAC CAGAACTTCT TCGCGCGCTC CAAGCTGGAG
GGCGGCAACG GATTTTTCGG CATCGGCGCC AGCGAACCGA AGCCGCAGAT CCTCACGGGC
GGCCCGATCG CGTGGGCCTG TGTCAGCAAT CAGTTTTTCG CCAGCATCCT CACTCCGGAC
CAACCCGGCT CGGGCCTCAT CACCCGGCGC GTGAAACTGC TGCCGATGCT GCCGGACGAG
AACCGCAACG CTTACGGCAT CACGAGCGCG GCGCAGTTCG ACCTCACGCC GCTCGCCGCC
AACGCCGAGA CCAAGCTCGG GGCGGACTTC TACGTCGGGC CGAAGGAATA TCGCCGGCTG
GCGAACGGCG ACGTGTTCAA GAAGGACCAA GACAAGGTCA TGCAGTTCGG GTTCTTCAAG
TTCTTCAGCC AGATCCTGCT CACGCTCATG ACCTGGGTGC ATGGCTGGTT CCCGAGCGCG
GCGTGGGCTT GGGGCTGGGC GGTCGTGATC ACGACGCTCA TCCTGAAAAT CATCTTCGTG
CCCTTCACGC TCGCGGCGTC GCGCTCGGCC AAGCGCATGG CCAAGATCCA GCCGGAGATG
CAGGCGGTCC GGGAGAAATT CAAGGACAAC CCGCAGAAGC TGCAGGCGGC GACGATGGAG
CTCTTCAAGA AGCACAAGGT GAATCCGATG GGCGGATGCT TCCCGATCCT GATCACGATT
CCGTTCTTCA TCGGTTTCTT CCAGATGCTC CAGAGCGCGG CTGAACTGCG GTTCCAGCCC
TTCCTCTGGG CCTATGATCT GTCGGCGCCG GACACCGTGC TGCACATCGG GCCATTCCCG
CTGAACATCA TGCCGCTGCT GATGGGCGCC ACGATCGTCA TCCAGATGCG GCTCACGCCT
TCGCCCGCCG TGGATAACAT GCAGGTGAAG ATGATGAAGT TCATGCCCTA CATCATGACG
ATGTTCTGCT ACACGTTCTC CTGCGCGCTC GCGCTCTATT CGACCGTCAA CGGCATCTTC
ACCATCGGTC AGCAGCTCGT GATCAACCGC ATGAAGGACA ATCCCGGCCC CGTCGGCCCC
GGCACCGCTG CCGCCACGAC CGCGGCAGCG TTCACCAAGT CCACCAAGAA CGTCACGCCG
AAGAAAAAAA AATAA
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| Protein sequence | MDKKNTVIGV LLLLAAFASL YLGQRLSPQR SAQPTPTIST PQTAATGTAP ANALPTGTPS
APVPSTAFAS VAENDGSATT VTLQNDFIAA HVTDFGGALH DVALKKYPAE RDRPEPFVFN
ALHADPMLAL VDFPGLDRQT RFELVSHTPT SAVYRAVLNG QVEVTRHYSV LQAGDKSGDP
YVVRHETTFR NLSDQTVTLP RVALSLGTAA PTDANDPGIR LTTGYSNGDD QNFFARSKLE
GGNGFFGIGA SEPKPQILTG GPIAWACVSN QFFASILTPD QPGSGLITRR VKLLPMLPDE
NRNAYGITSA AQFDLTPLAA NAETKLGADF YVGPKEYRRL ANGDVFKKDQ DKVMQFGFFK
FFSQILLTLM TWVHGWFPSA AWAWGWAVVI TTLILKIIFV PFTLAASRSA KRMAKIQPEM
QAVREKFKDN PQKLQAATME LFKKHKVNPM GGCFPILITI PFFIGFFQML QSAAELRFQP
FLWAYDLSAP DTVLHIGPFP LNIMPLLMGA TIVIQMRLTP SPAVDNMQVK MMKFMPYIMT
MFCYTFSCAL ALYSTVNGIF TIGQQLVINR MKDNPGPVGP GTAAATTAAA FTKSTKNVTP
KKKK
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