| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1455 |
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| Symbol | |
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| ID | 6206798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1818492 |
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| End bp | 1819529 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641691096 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001818339 |
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| Protein GI | 182413273 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCCG CCCGTCTTCC CCGCTTCATC CTTCCGGCCG CCCTCGTGCT CGCCCTCGTC
GGCTGCGGCA AGCACGAGCC CGCCGCCGCG ACCGCTCCCG ATCTTCCCGC CGCCAAGGTC
CAGCTCGCCA CCGCCCGTAT CCAAACCGCG CCGGCGCTCG TCGAAATCAC CGGCACGGTC
CGGCCGGTCC AGCGCGCGAC GCTGGCGGCG AAAGTCATGG GCGCGATCGA GGAACTCCCG
GTCTCGCTGG GCCAGAAGGT CCAGGCCGGC GATGTGCTCG CGCAGATTGG CGCCGGCGAG
ATCTCCGCGC GGCTGCTCCA GGCCAAATCG CAGCTCAACG TCGCCCGCCG CGATCTCGAT
CGCGAACGCG ACCTCCTCGG CAAGGGCGCC AGCACCGCCG ACATGGTCAA GGGCCTCGAA
GACCGCCTCG CCATGACCGA GGCGATGGTC CGCGAAGCCG AGGTGATGCT CGGCTACGCC
ACGCTGCGTG CGCCCTTCGA TGGCGTGATC GCCCGCAAAC TGGTCAACGT CGGCGACCTC
GCCGCGCCCG GCGTCCCGTT GCTCGAAGTC GAAGGCACCG GTTCCTTCCA AGTCGAGGCC
GCCGTGCCGG ACTCGCTCGT GGCTCCGCTC CTCGTGGGCC AGCAGCTTGA GGTCGCGGTG
CCCTCCATAG GCGCGTCCTT TCAGGGGTTG GTCACCGAAA TATCCTCGGC CGCAGACGCC
GCCGCGCACA GCGTGCTGGT GAAACTCGCC GTGCCGCAGG AGGCCACCGT GCGCTCCGGC
CAGTTCGCCC GCGTGCAGGT ACCCGGCGCA CCGGTCAAAT CGCTGCTCGT CCCTGCCACC
GCGGTCTCGA CCTTCGGCCA GCTCGAACGC GTGTTCGTGC GCGGCACCGA TGGTCGGGCC
GGGCTGCGGC TCGTGAAGTC GGGCGCAACG CACGGCGACC GCGTCGAGAT CCTCTCCGGA
CTCGACGACG GCGAGGAGGT CGTGGTCGCC GCGCCTGCCG GATTGCGCGA GGGCCAGCCG
CTGGAGGTTG TCCAATGA
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| Protein sequence | MNSARLPRFI LPAALVLALV GCGKHEPAAA TAPDLPAAKV QLATARIQTA PALVEITGTV
RPVQRATLAA KVMGAIEELP VSLGQKVQAG DVLAQIGAGE ISARLLQAKS QLNVARRDLD
RERDLLGKGA STADMVKGLE DRLAMTEAMV REAEVMLGYA TLRAPFDGVI ARKLVNVGDL
AAPGVPLLEV EGTGSFQVEA AVPDSLVAPL LVGQQLEVAV PSIGASFQGL VTEISSAADA
AAHSVLVKLA VPQEATVRSG QFARVQVPGA PVKSLLVPAT AVSTFGQLER VFVRGTDGRA
GLRLVKSGAT HGDRVEILSG LDDGEEVVVA APAGLREGQP LEVVQ
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