| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1404 |
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| Symbol | |
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| ID | 6208040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1765031 |
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| End bp | 1766200 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641691046 |
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| Product | DNA polymerase III, delta subunit |
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| Protein accession | YP_001818289 |
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| Protein GI | 182413223 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.162572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGA ACGTCCGCGC GCCGCGGAAG TTTTTTGTCG CCCTGCCGCC GTCCCGCTTC
CCAAATCGCG CCATGCCCGC CGGCCGGAAT TTCACTTTCA TCTGCGGCCC CGACGATTTC
CTCGTCGGCC GGCTCGGGGC GGAAAAGTTC GCCGCGCTGG CGGCCGAGGT GCCGGACGAG
TTTTCCCGCG AGGTGCTGAG CGGGTTTGCC AACAACGTCG GCGAGGTCGC ATCCGCGATC
AACCGATTCC GCGATTCCGT GCAGACGATC TCGATGTTCG GCGGTCGCCG CGTGGTCTGG
CTGAAAGACG TCAACTTCCT GGCCGACTCG GTCACCGGTC GGGCGGAAAG CACACTGAAG
CTGCTCGAGG ACCTGCAGGA AATTCTGACG AAGATCGATC CCGCGGAGAC GGCAGTGCTC
ATCACGGCCG CGCCGGTGGA TCGCCGCCGG GCGTTTCCGA AATGGTGCGA GAAGAACGCC
GACTTCACGC TCGTGGCCGC CGACGCGGGA GACGGCGCCG CGCTCGAGGG CGTCGTGCTC
GCCGAGGCCA AAGCGGTCGG CGCGACGATC ACGCCCGATG CCGTCCGGCT GCTGCTCGTC
CGCGTGGGCG CGAACACGCG CTTGCTGGTC GAGGAGGTGC ACAAGCTCGC GAACTACGCC
GGCGAGGGCC AGCCGATCGA GGAGGCCCAC GTCGGCGAGC TCACGCCCAA CGTCGCCGAA
GGCGATTTCT TCGAGGCGGC GGAGGCGTTT TTCAGCGGCG ACCTGAAATG GACGCTCGCC
GCGCTCGAGC GGCAGTTCTT CGCGGAGCCG AATGCCGCCC GGCCGATCCT CGCCGCGCTG
CAGAACCGCA ACCGAATCCT GTTGCAGGTC CGGGCGCTGA TCGATGCGGG CGAGGCGCGG
ATCGGTCCAC GCGGGCTCGA CGGCTTGCCG AAAGCGGGCG CGACCTACGC CGCGAAGTTC
ACCGGTGCGA CCGAGAAGAG TTCGTTCAAT CTCTTTACGC AAAATCCGTG GTATGTCGGC
AAGCTGGCCG GCAGCGCGAA GCTCCCTTCG CTGCGCCGGC TGATCGACAA CCAGCAGGAG
TTCATCACCG CATTCGAGGA ATTGATCCGC CGGCCGCAGG AGCAGGAGGA TGTTCTGCGC
GAAATGGCCG TACGTTGTCT CGCGGCCTGA
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| Protein sequence | MNANVRAPRK FFVALPPSRF PNRAMPAGRN FTFICGPDDF LVGRLGAEKF AALAAEVPDE
FSREVLSGFA NNVGEVASAI NRFRDSVQTI SMFGGRRVVW LKDVNFLADS VTGRAESTLK
LLEDLQEILT KIDPAETAVL ITAAPVDRRR AFPKWCEKNA DFTLVAADAG DGAALEGVVL
AEAKAVGATI TPDAVRLLLV RVGANTRLLV EEVHKLANYA GEGQPIEEAH VGELTPNVAE
GDFFEAAEAF FSGDLKWTLA ALERQFFAEP NAARPILAAL QNRNRILLQV RALIDAGEAR
IGPRGLDGLP KAGATYAAKF TGATEKSSFN LFTQNPWYVG KLAGSAKLPS LRRLIDNQQE
FITAFEELIR RPQEQEDVLR EMAVRCLAA
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