Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1361 |
Symbol | |
ID | 6207533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 1694476 |
End bp | 1695312 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641691002 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001818246 |
Protein GI | 182413180 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCG GCGTCCGCGC TCACGATTTC GGTCAACTTC CTCCCGACGA ACTGGCGGCG ACCATCGCCC GCCACGGCTT GTCCTGCGTG CAACTCGCAC CGCCCAAGGC GATCGCAGGT TGCGACGGCT CGACCGCGCG GCTCACGCCC GAATTCGCCC GTCGCGTACA CACGGCCTTC CAGCGGCACG GCGTGGAGAT CTCCGTGCTC GGCTGCTACA TCAACTTGGC TGACCGCAAC GAATCTCACC GTCGCGCGCA GCTGGAACGG TTCAAAGCCT ATCTGCGGCT CGCCCGCGAT TTTGGCGGTC CGATCGTCGG CACGGAAACC GGTTCATTGA ACTCCGATTT CTCGCGTCAT CCCGAGAATG CGGGCGACGA GGCCTTCGAC CTCGTGGTGG CCAGCGTGCG CGAACTCGCC GACGAGGCGG AAAAATGCGG CGCGATCGTC GGCATCGAGG CGGTCGAACG CTACGTGATC TCCTCGCCGC CGCGGCTCAA GCGACTGTTG GAAGCCGTCG ACTCGCGCAG CGTTCAGGTC ATCTACGATC CGGTGAACCT GCTCTGGAGC ACGAACCACC AGCGGCAGGA TGAGATCATG GACGAGGCGC ACCAGCTGCT GGGCGACCGG ATCCGGATCG TGCACGCGAA GGATTTCACG GTGGACGCCG GCAAATTTCA CGAGCATCCC GCCGGCCGCG GCGCGCTGCA CCAGGAGCGC TGGATGCGCT GGTTGAAAGC TCAGCCGCGG GACGTGCCCG TGCTGCTGGA GAACACGCAT CCGTCCACGA TCGCCCACAC CGTCGCGTTT ATGCGCGACA CCTGGCAGCG CGCCTGA
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Protein sequence | MNLGVRAHDF GQLPPDELAA TIARHGLSCV QLAPPKAIAG CDGSTARLTP EFARRVHTAF QRHGVEISVL GCYINLADRN ESHRRAQLER FKAYLRLARD FGGPIVGTET GSLNSDFSRH PENAGDEAFD LVVASVRELA DEAEKCGAIV GIEAVERYVI SSPPRLKRLL EAVDSRSVQV IYDPVNLLWS TNHQRQDEIM DEAHQLLGDR IRIVHAKDFT VDAGKFHEHP AGRGALHQER WMRWLKAQPR DVPVLLENTH PSTIAHTVAF MRDTWQRA
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