| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1346 |
|---|
| Symbol | |
|---|
| ID | 6204516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1661267 |
|---|
| End bp | 1664242 |
|---|
| Gene Length | 2976 bp |
|---|
| Protein Length | 991 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641690987 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001818231 |
|---|
| Protein GI | 182413165 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCGTC GCTTCCTTGC CGCCATCCTC CTCGGCGCCC CAGCGCTGCT CGAGTCCGCC
GCGGCCGCGC CGGAGACTCC GGCGGCTCCG CCGCCGGCCG CCGCGCAACC GCTCGCCTGG
CCCGAGGTGC ACCGCGAGAC GAAGCCGTGG TCTCGCTGGT GGTGGTTCGG CAACATCGCC
GACGAAAAAT CGGTCACTGC CCAACTGGAA GCCTGCGCCG CCGCCGGTCT TGGCGGCCTC
GAGATCACGC CGATCTATGG CGTGCGCGGA TACGAGGATC GGTTCGTACC GTTTCTTTCA
CCGCGTTGGA TGGAGTTGCT GCGGCACACG CTCGTCGAAT CACGCCGACT CGGACTGGGC
ATCGATCTCG CCACCGGCAC CGGCTGGCCG TTTGGCGGGC CGTGGCTCCA GCCCGAAGAC
GTCGCCCACA CGCTCGCGCA TCGCGTTTAT GAAATAAAAC CCGGCGAACG ATTGGGCGAA
CCTGTCCGGC TCACCGCCAC CGGGCTCGTG CGTGTCGCCG GTCCGCGGCC GGTGAAGCTC
GAGGAACTAC GCGAGCCGAT CACCGCCAAC GCAAACCTTC AGGAGCTCGC ACTCGATCAA
GTGCGGTTTC CAAAACCGAT GCGGCTGGTG TCGCTCATGG CTTTCCCGCT CGCCCTCGCC
GGCGTCGCAC CCACTCCGCT CGACCTCACC TCACGCGTCC GCGCCGACGG CTCGCTCGAC
TGGACCGCGC CCGCCGACGC GGGCACGTGG ACGCTCTACG CGCTGTTCGC AGGTCCGCAC
GGCAAGATGG TCGAGCGCGC CGCCCCCGGC GGCGAGGGCT TCGCGCTCGA TCACTTCTCC
TCTACCGCGC TGCGCGCCTA CCTCGCCCGC TTCGACGCCG CATTCGCCGA AGGTCACCTG
TTAAGTGACC TTCCTTCCGC GGCCGGTGCG GATTCGGCGC CACGGCTGCG CGCGTTCTTC
AACGATTCCT ACGAGGTCGA CGACGCCGAC GGCGAAGCGA ACTGGACGCC GCGTTTTCTG
GAGGAATTCC AAAAACGCCG CGGCTACGAC CTACGCGCGC ACCTGCCGGA GCTGCTCGCC
ACCACCGAGA ACGACTTCAG CGCGCGCGTG CGCAGCGACT ACCGCGAAAC GATCTCCGAC
CTGCTCCTCG ACGAATTCAC GAATCCGTGG CGCGAGTGGG CGCACCAGCA CGGGGCGTTG
ATCCGCAACC AGGCGCACAA CTCGCCGGCG AACATCCTCG ATCTCTACGC CGCGAGCGAC
ATTCCCGAGC AGGAGGGCAA CGGCTTCCTG GCTATGAAGC TCGCCTCTTC CGCCGCGCAC
GTCAGCGGCA AGCCGCTCGC GTCGGCCGAA ACCGCCACGT GGCTCAACGA GCACTTCCTC
ACCACGCTCG CCGAACTGAA GCAGAATACC GACGAATTCC TGTTGGCCGG CATCAATCAC
GTTTGCTACC ACGGCACCGC GCTCTCACCG CTCGACGCCG CGTGGCCCGG GTTCAATTTC
TACGCGTCAG TCGAACTGAA TCCGCTGAAC CCGTTCTGGC GCGATTTCAC CGCGCTCAAC
GCCTACGTCG CCCGCGCGCA ATCGTTCCTG CAGTCCGGCA CGCCGGACGA GGACGTCCTG
CTCTATTATA ATATCCACGA CCGCTGGGCG GAACGCGGCA ATGGCCGGAT GCCGCACTTC
GGCCACGGCG GCCGCGATCC GTCCGGTTCG CTCGCCGCCA CCGCCGCCGC GCTGCACGAA
GCCGGTGTCG GTTTCGACTA TGTGTCCGAT CGGCAACTGC AAAAGATCAC GCCCGACCGC
GCGATCGTGG TGCCGCAAAC CACGTTCATG CCCGAGGCGA CGCTGGCGCG CCTGGTGGAA
CTCGCTGCGC AGGGCGCGAC CATTCTCTTC GTCGATCATC TTCCCCGCAG CGCGCCCGGG
TTGGCGGGGC TCAACGCGTC GGGACGTTTC GAGCAACTCC TGCAGAAGAT TCAAACCCAG
CTCGCACCCA GCGACGTCCT CAGCGCGGCC AAGCTGGACG GCGGCCAGTT CCTGCTCGGC
CCGGGCATTC GCGAATTGCT CGATCGTTGT CCCGGGATCG CGCGTGAATC ACTTCGCCCG
TTCGGACTCG AATTCGTCCG CCGTCGGACC GACGCCGGCG CGCTCTATTT CCTCGTCAAC
CGTAGCAACC AACCGATCGA CCGCTGGATC CCGCTGCAAT CACCCGCCGC CGCGGCCGCG
CTCTTCGACC CCATGACCGG CAACGCCGGC CTCGCGGCGA TCCACTCGTC CGGTCCGACT
GGGAGCGCGA GCATCCCGCC CGCTCATTCA GACGGCGCGC GAGCCTCCCG CGCTCCCACT
GAAATCTACC TCCAACTCGC ACCCGGCGAA TCCTGCGTCG TTCAGCTCCA CGCCACACCC
GTCGCCGGTC CCGCCTGGCA CTACTGGCAG CGCGCCGGCG AACCGCACCT GCTCACCGGC
GACTGGTCAG TGACGTTCAC GGCCGGCGGC CCCGCGCTTC CCGCCGCCGC GCAACTTCAC
GCGCTCACCT CGTGGACCGA CTTTGCCGGC GAGGCCGGCC GAGCGTTCTC CGGCACTGCC
GTCTACACGC GGCGCTTCGC GCGTCCCTCG GGCGACGCGC CGGCGTGGGA GCTCGATCTC
GGCACCGTCG GCGACAGCGC GCGCGTGACG CTGAATGGCC GCGAACTCGG CGTCCTGATT
CAGCCGCCGT GGCGAGTCGT GATCCCGGCG AACGAATGGC GCGACGAAAA CGCCCTCGAG
ATCGACGTCA CCAATCTCGC CGCCAACCGC ATCGCCGACC TCGACCGCCG AGGCGCCTCG
TGGAAAATTT TCTACAACGC GAATTTCCCC GCGCGTTTTC GCGAAAACGT CGGCCCGGAT
CGGCAGTTCA CGGCCGCGCG CTGGTTGCCG CGCAACTCCG GGCTGCTCGG CCCCGTCAAG
CTCACGCCTC TACAGAAATC AGATCCGACC CTGTAG
|
|---|
| Protein sequence | MHRRFLAAIL LGAPALLESA AAAPETPAAP PPAAAQPLAW PEVHRETKPW SRWWWFGNIA
DEKSVTAQLE ACAAAGLGGL EITPIYGVRG YEDRFVPFLS PRWMELLRHT LVESRRLGLG
IDLATGTGWP FGGPWLQPED VAHTLAHRVY EIKPGERLGE PVRLTATGLV RVAGPRPVKL
EELREPITAN ANLQELALDQ VRFPKPMRLV SLMAFPLALA GVAPTPLDLT SRVRADGSLD
WTAPADAGTW TLYALFAGPH GKMVERAAPG GEGFALDHFS STALRAYLAR FDAAFAEGHL
LSDLPSAAGA DSAPRLRAFF NDSYEVDDAD GEANWTPRFL EEFQKRRGYD LRAHLPELLA
TTENDFSARV RSDYRETISD LLLDEFTNPW REWAHQHGAL IRNQAHNSPA NILDLYAASD
IPEQEGNGFL AMKLASSAAH VSGKPLASAE TATWLNEHFL TTLAELKQNT DEFLLAGINH
VCYHGTALSP LDAAWPGFNF YASVELNPLN PFWRDFTALN AYVARAQSFL QSGTPDEDVL
LYYNIHDRWA ERGNGRMPHF GHGGRDPSGS LAATAAALHE AGVGFDYVSD RQLQKITPDR
AIVVPQTTFM PEATLARLVE LAAQGATILF VDHLPRSAPG LAGLNASGRF EQLLQKIQTQ
LAPSDVLSAA KLDGGQFLLG PGIRELLDRC PGIARESLRP FGLEFVRRRT DAGALYFLVN
RSNQPIDRWI PLQSPAAAAA LFDPMTGNAG LAAIHSSGPT GSASIPPAHS DGARASRAPT
EIYLQLAPGE SCVVQLHATP VAGPAWHYWQ RAGEPHLLTG DWSVTFTAGG PALPAAAQLH
ALTSWTDFAG EAGRAFSGTA VYTRRFARPS GDAPAWELDL GTVGDSARVT LNGRELGVLI
QPPWRVVIPA NEWRDENALE IDVTNLAANR IADLDRRGAS WKIFYNANFP ARFRENVGPD
RQFTAARWLP RNSGLLGPVK LTPLQKSDPT L
|
|---|
| |