| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1274 |
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| Symbol | |
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| ID | 6204626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 1578619 |
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| End bp | 1580172 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641690915 |
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| Product | TGF-beta receptor type I/II extracellular region |
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| Protein accession | YP_001818159 |
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| Protein GI | 182413093 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC CTTCAGTCAG CGCCGCGGTC CCGGCGTCGA ACGCGCGCAT TCCGCGCCAG
ATCCCCTACA TCATCGGCAA CGAAGGCTGC GAGCGGTTCA GCTTTTACGG GATGCGCAAC
ATCCTGACGG TGTTCCTCGT CTCGTCGCTG CTCGCGTATC TGCCCGAGAG CGAACGCGCC
GGCGCCGCGA AGGACGTCTT TCACACGTTC GTGATCGGTG TCTACTTTTT CCCGCTGCTC
GGCGGCTGGA TCGCCGACCG GTTTTTCGGG AAATACCACA CGATCTTCTG GCTGAGCCTC
GTCTACTGCG TCGGGCAGGG CTGCCTCGCG TTGTTCGTGG ACAACAAGCT CGGGTTCTAT
GGCGGGCTCT TTCTCATCGC GCTCGGCTCG GGCGGCATCA AGCCGTGCGT CGCCGCCTTC
GTCGGCGACC AGTTCGATCA GTCCAACAAG CACCTCGCGA AGGTGGTTTT CGACGCGTTC
TACTGGATCA TCAACTTCGG GTCGTTCTTC GCCTCGCTGC TGATGCCGAT TTTCCTGAAA
CAGCTCGGGC CGGCGATCGC GTTCGGCGTG CCCGGTGTGC TGATGTTCAT CTCGACCGTG
ATCCTGTGGC TGGGCCGTCG GAAATACGTC ATGGTGCCAC CCGCACCATC GAATCCGCAC
TCGTTCCTGC GCGTAGCGCG CACCGCGCTC GCCGCGGGCG TGTCAGGACG CGTGTTGGCC
GGACTTGGCC TGGTGCTCGC GATCGCCGCC TTCGCCAAGA TAGGATCGTT TGGCTTCGTG
ATCTCCGCGT GCGTCGCGCT GGTGGCCGTC ATCGGCTTCG GCGGCGCGGG CGTGTGGATC
CAACTCGAGC GCGCGCGGGG CACTCATCCC GACGAAGCCG TCGATGGCGT GCGGGCGGTG
CTGCGCGTGC TCGTGCTGTT CTTCCTCGTC ACGCCGTTCT GGTCGCTGTT CGACCAGAAG
GCTTCGACGT GGATCCTGCA GGCCGACCTG ATGAGCAAAC CGCACTGGTT TCAGTCGTCG
CAAATGCAGG CGCTGAATCC GCTGCTGGTG ATGCTGCTGA TTCCGTTGAA CAACCTGGTC
GTCTATCCGG CGCTGCGGCG GTTCGGATTC GAGCCGACGC CGCTGCGGCG GATGGGCGCC
GGCATCGCTT TCGCCGGACT ATCGTGGATC GTCGTGGGCG GGATGCAGCT CGTGCTCGAC
GGCGGACACG TGTTCTCGAT CACGTGGCAA GTGCTACCCT ACGCGCTGCT GACGCTCGGC
GAAGTGCTGG TTTCCGCCAC CGGCCTCGAG TTCGCCTACA GCCAGGCGCC GCAGGCGATG
AAAGGTGCGA TTCTGAGCTT CTGGAGCTTG TCGGTGACGA TCGGCAATCT CTGGGTGCTC
GTCGTGAATG CCGGCGTGAG AAGCCCGACC GTCACCCACG TTATCGGGTC GACCGGCTTC
GGCGTGACGG CATTTCAGAT GTTCTTCTTC GCGATCTTCG CGTTTGCCGC CGCAGCGGCA
TTCGGGCTCT ACGCGCTGCG CTACAAGATG GCTGACCATT ACCGGAAGAG CTGA
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| Protein sequence | MTTPSVSAAV PASNARIPRQ IPYIIGNEGC ERFSFYGMRN ILTVFLVSSL LAYLPESERA
GAAKDVFHTF VIGVYFFPLL GGWIADRFFG KYHTIFWLSL VYCVGQGCLA LFVDNKLGFY
GGLFLIALGS GGIKPCVAAF VGDQFDQSNK HLAKVVFDAF YWIINFGSFF ASLLMPIFLK
QLGPAIAFGV PGVLMFISTV ILWLGRRKYV MVPPAPSNPH SFLRVARTAL AAGVSGRVLA
GLGLVLAIAA FAKIGSFGFV ISACVALVAV IGFGGAGVWI QLERARGTHP DEAVDGVRAV
LRVLVLFFLV TPFWSLFDQK ASTWILQADL MSKPHWFQSS QMQALNPLLV MLLIPLNNLV
VYPALRRFGF EPTPLRRMGA GIAFAGLSWI VVGGMQLVLD GGHVFSITWQ VLPYALLTLG
EVLVSATGLE FAYSQAPQAM KGAILSFWSL SVTIGNLWVL VVNAGVRSPT VTHVIGSTGF
GVTAFQMFFF AIFAFAAAAA FGLYALRYKM ADHYRKS
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