| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1235 |
|---|
| Symbol | |
|---|
| ID | 6206276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1526241 |
|---|
| End bp | 1527962 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641690876 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001818120 |
|---|
| Protein GI | 182413054 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCGA CGACCTCCCC CACGAGCGCT GGTCAGGCGT GCGCGCCACC CAGCCTGGCC
GCACCGGTGA TCGAGTATGC CCCCTTGGCG ATGGTTGAGG TCGAGGGGCC GGACCACGTC
GTGTGCTTCG TCAATGCGGC GTTTTGCCGG CTGTTGCAGG CGCGCCGGGG CGACCTCATC
GGGAAACGCT TTGCGGAGAT CGTGCGCAAC GGCGATCAGT GTGTGCCGCT GCTCGACCGG
GTGTACCGAA CGGGTGAATG CGAGACCCAC GTTGAGCTGG ATCACGCCGC GCCCACGCCC
GTTTACTGGC TCTATGCGAT GTGGCCGGCG CTGGGGCCGG GGGCGCGCCC GGAACGCGTG
GTCATCCAGC TGACGAAGGC GCCTGATTCC CATCCGACCC TGTCGGCGAT GAACGAGGCC
CTGCTGATCA GCGGGCTGCG GCAGCACGAT CTCCGGGAGG CCGCGGAGAA GCTGAATGCG
AATCTGGCGG CCGAGGTGGC GGAACGCCAG CGGACCGCGG CTGCCTTGAG CGCCGCGAAT
GCGGAGCTGA AGCTCGCCCA ACTGGCCGCC GAGCGGGCCA GCCAGGCCAA GGACGGTTTC
TTTGCGGCCC TCTCGCACGA ACTGCGGACC CCGCTGACGC CGGTTCTCAT CACCGCGGCC
TCGCTGCGGG AGGACCCACG GTTCCCCGCC GACGTGCGGG AGGAACTCGC CATGATCGAG
CGGAACATCG CGCTGGAGGC CCGGCTGATC GACGATCTGC TCGACGTGAC CCGGATCGCG
CATGGCAAGC TGCAACTGCG CCTCCAATCC TGTGATGTCG CGATCTTGAT TGGTTATGCC
GTTGAGATCG TGCAGCCCGA TGCGCGGCAC AAGAACATCG CGGTCGAGTG CAACTTCGCG
GCGCGCGCCG GCGACCTGAT CGGCGATCCG GCGAGGCTTC AGCAGGTCAT CTGGAATCTG
CTGCGCAACG CCGTCCGCTT CACCCCGTCC GGCGGCAAAA TCTCGATCGC GACGCGCGAC
GACACCGGAC CGGCCGGACA GGATTGCCTG CGGATTGAGG TCAGCGACAC CGGGATCGGC
ATCGATCCGT CGTGCCTTGA TCGGATCTTC GTGCCGTTCG ACCAAGGCGG CGGGACGGGG
AATACGGCCA CCGGCGGACT CGGACTGGGG CTTTCGATTG CCCAGGCCGT CGTGGCCATG
CACGGCGGTC GGATCGCGGC TCACAGCGCC GGGCTGAATC GCGGCTCGAC CTTCGTGGTC
GAACTCCCGC GGAATCACAC CTTCACCGAA CCGGCGTCCG GTTCGGTTGC GGCGAACCAT
CGTCTTCCGG CTCCGGCTGG GGCGGTCGGG CCGGCCACGC GGCTGCGCCT GCTGTTGGTG
GAAGATCACG CGGCCACCCT CAACGCGGTC TCGCGGCTGC TGCGGCGGGA CGGACACACC
ATCGTGGCGG TCGGCACGGC GGCCGAGGCC GTGAAGGCGG CTGAAGTGGG GGAGTTCGAC
TGCGTGGTGT CAGATATCGG ACTGCCGGAT GGGAGCGGGC TCGAGTTGAT GAAAACCCTC
CGTGCGCGTC ACGGTCTGCG GGGGATTGCG CTGAGTGGCT ACGGCAGGGA GGCGGACTTG
ATCCAGGCGC GCGAGGCGGG CTGTGTCGCC CATCTGACCA AGCCTGTGGC GATCGCCGAA
CTGCGCGCGA CGATCGCGTC CATTCAAGCC TGCGAGAAAT GA
|
|---|
| Protein sequence | MEPTTSPTSA GQACAPPSLA APVIEYAPLA MVEVEGPDHV VCFVNAAFCR LLQARRGDLI
GKRFAEIVRN GDQCVPLLDR VYRTGECETH VELDHAAPTP VYWLYAMWPA LGPGARPERV
VIQLTKAPDS HPTLSAMNEA LLISGLRQHD LREAAEKLNA NLAAEVAERQ RTAAALSAAN
AELKLAQLAA ERASQAKDGF FAALSHELRT PLTPVLITAA SLREDPRFPA DVREELAMIE
RNIALEARLI DDLLDVTRIA HGKLQLRLQS CDVAILIGYA VEIVQPDARH KNIAVECNFA
ARAGDLIGDP ARLQQVIWNL LRNAVRFTPS GGKISIATRD DTGPAGQDCL RIEVSDTGIG
IDPSCLDRIF VPFDQGGGTG NTATGGLGLG LSIAQAVVAM HGGRIAAHSA GLNRGSTFVV
ELPRNHTFTE PASGSVAANH RLPAPAGAVG PATRLRLLLV EDHAATLNAV SRLLRRDGHT
IVAVGTAAEA VKAAEVGEFD CVVSDIGLPD GSGLELMKTL RARHGLRGIA LSGYGREADL
IQAREAGCVA HLTKPVAIAE LRATIASIQA CEK
|
|---|
| |