| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1214 |
|---|
| Symbol | |
|---|
| ID | 6206698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1509380 |
|---|
| End bp | 1510225 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641690856 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001818100 |
|---|
| Protein GI | 182413034 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.839406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGCT CAGTCCTCGT TTCGTCCCCC CTCCCGCATC GTGCCCTGTC GACCGACGAC
CTTCGCCGCG TCGCCCCGTC CGTGTTCGCC GTGCACGCCC GGCCCGGCGT TTCGTCCCGC
TATGCCTTCG TTTCCACCGC CCAGGTGGTC GACCTGCTGC GCTCCGATGG GTGGGAGCCC
GTGAAAGCCG GCGAACAGCG GGTCCGGCTC GATACCCGGC GCGGATTCCA GCTGCACGAG
ATTCGCTTCG CCCGGCGCGT CGATCTGGAG GTCGGCGCGT TCCAGCTCGG GGAGACCCGC
CCGGAAATGA TCCTGCAGAA CGCGCACGAT GGTACGCGTG CCTATCGCAT CGACGCGGGA
CTCTACCGCC TCGTCTGCCG CAATGGCCTC GTCGTCTCCG ACGCGGAATT CGCGCACGTG
GCGATCCGGC ACCTCGACGT GTCCGCCGAG CGGTTTACGT CCGCGGCCCG CACGATCGCC
GACAGCGCGC CCAAGGTGCT GGCGTCCGTC GCGCGCTGGA AAGCGGTGAC GCTTTCGCCG
GCGGCCCGGG TCGAGTTCGG CCGGCGGGCC GCGGCGCTGC GCTGGGATCC GGAACAGCCG
GTCGGCCGGG CGCTCTCGCC GGAGAAGCTG CTCGCCCCGG TGCGGGTGGG CGATGCGGCC
ACCGATCTCT GGACCACGTT AAATGTAGTC CAGGAGCATT TGCTTCGGGG CGGGACACGT
TACGTCGCCG TGATCATCGG CTCGCCGCTC CGGCAGAACA CCACCCGACC CGTGGGCGGA
CTCCAGCACG CCCAACTCGT GAACAAGCAG CTCTGGGCGC TCGCCGAGGA ATTCGCGCGG
AACTGA
|
|---|
| Protein sequence | MNSSVLVSSP LPHRALSTDD LRRVAPSVFA VHARPGVSSR YAFVSTAQVV DLLRSDGWEP
VKAGEQRVRL DTRRGFQLHE IRFARRVDLE VGAFQLGETR PEMILQNAHD GTRAYRIDAG
LYRLVCRNGL VVSDAEFAHV AIRHLDVSAE RFTSAARTIA DSAPKVLASV ARWKAVTLSP
AARVEFGRRA AALRWDPEQP VGRALSPEKL LAPVRVGDAA TDLWTTLNVV QEHLLRGGTR
YVAVIIGSPL RQNTTRPVGG LQHAQLVNKQ LWALAEEFAR N
|
|---|
| |