| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1195 |
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| Symbol | |
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| ID | 6204547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 1490540 |
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| End bp | 1493263 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641690837 |
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| Product | conjugative relaxase domain-containing protein |
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| Protein accession | YP_001818081 |
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| Protein GI | 182413015 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.844088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACGG TCGGAGTCAT CCGCAACGGT GCAACCTACC TTTCGCAGCA CCTGAACAAA
AACGATTACT GGACCGAGGG GGAGAAGGAG GTCCAGGGCG AATGGATCGG GCACGGCGCG
ACGTTGCTCG GCCTGGAAGG CGGCGTGCAG GAGAAACCGT TCGAGGCGCT TCGACGCAAT
CGGGATCCAC GGACGGGGAA GCGGCTCACC GCCCGCGAGG ACACGCAACG GGTCGCGTTC
TTCGACGTGC AATTGTCGGC GCCCAAGGAC GTGAGCGTGC TCGCGATGCT CGGCAACGAC
GAACGGATCG ATGCCGCCTT CCGGGAGGCG GTCAAAATCG CGCTCGAAGA GATGGAGCGA
TTCGCAGCCG TGCGGGAGCG GCGCGGGGAC GCGCGAGCCA GCGAAGCGTT CCGGCTGACC
GGAAATTTCG CCGGCGCGCT GTTCTTCCAC AACACGAGCC GCGATCTCGA TCCGCAGTTG
CACGCGCATG CCGTCTTCGC GAATGCCACC TGGGATGCGG AGCGCGGCGG GTGGTATGCC
CTGCAACCCG CCGAGATGCT CCGCGCCTCC GGCTATCTCC GGCAGGTCCT TTATCGTGAG
CTGGCCGCCC GGCTGCGCGG ACTCGGGTAT GAGCCGTATG ACATGAACGC GAATGGGTTT
TCGATTCGCG GGGTTGAACA CCTGCGCGAG CGTTTTTCGA AACGCACACG GCGCGTGCAG
CAGCTGGCGG ACGAGTTCGC GCAGAAGAAG GGTCGCCGGC CGACAAACAG TGAATTGAGA
ATTCTCGTGC GGGAGTCGCG GGCGGACAAG CTGACGAACG TCAGCACGGC GGAGGTTCGC
GCACGCCAGC GGGCCGAATT GAGTGGCGAG GAAGCGCAGG CGCTCGCTGG GTTGGTGACC
GCCGCGCGCG GTCGAGCGCC GCGGCGGCAA TGGTCGCAAG GCCAGACGCT GGCCGTCCTG
GAGGCCGCGC TGCGCCACGT TTACGAGCGC AGCAGCGTCG TTCGCGAAGG CGAGATCCTG
AACGCGGCGC TCGATCTCCA CCCCGACTTC TATCGCTGGC GGGAGCTACG CCAGGCGCTC
GAACAGCATC CGGAGGCGAT TCGCCGCGAC GGCGAAATGA GCCTGCGACC GATCCGACTC
GAAGAAGCGG CCACGGTCCG GCGGGTCATG GAGGGGCGGA ACACGCGGTT CCCGCTCGGC
ACGGCGTCGC ATCTGCCGGA ACGACTGACG CGCGGACAAT TGGCCGCCGC GCGGGCACTG
CTCGCCAGCA AGGATTTCGT GAGCGTCTTG ATTGGCGACG CCGGCACCGG CAAGACGACC
GTCCTAAGCG CCATCGAAGC GGCGCACCGG CAGGCCGGCG GCCAGCCGTT CCTGCCACTG
GCGCCGACGA CCCGCGCGCG GGAAGCGCTG GTGAGCGCCG GATTCGAGCA CGCGGACACG
GTCCAGCGTT TCCTCGTGAG CGAGGTCTTG CAGGCGCAGT CGGCGCGACG CGTGGTTCTC
GTCGACGAGG CGGGACTTTT GTCGACGCAG CAATTGGACG GGCTCACCCG GCTCGCCGGG
GAGCAGCGGG CGCGTCTGCT CCTGGTGGGG GATACGAAAC AGCACTACAG CGTCCAGCGC
GGCGATGCCC TGCGCAATGT GATCAAACAC TCCGGCGTGC CGGTGGTCCG GCTGTCGGAG
GTCCTGCGCC AGCGCGGCGA GACCGACCGG CAATTCAGCC GCATGCTGGC GTCGGGAGAG
GTGATGGAGG CGTTCCACTA TGCCGCCCGC CGCGGACTGA TTCGCGAGTT GGGTGACGAC
GAAGCCCTGT TCACCCAGGC CGCCGAGCAC TACGCGAGCA ATCTCGCGCA GCGGGTCGAG
ACGCTGGTCG TCATCCCCTT CTGGGACGAA ATCGAACGCT TCAACGTGCA TGCGCGCGCC
GCGCTGCGTC GCCGCGGACT GCTCGGCGAG GTGGAGGTGG TGCGCGAGGC GGTGAAGCCG
GTCGGGTGGA GCGAAGAACA GAAGACGCAC TGGGACCAAT ACCGGATCGG CGACCGATTG
CTCTTCGTCC GGGATACGCG GTTCTTCAAG CGGGGCACAG CCGCCGAGGT GACAGCCATC
CTGCCTGACG GGCTCCAGGT CACCGGGGCC AAGGGGCGTT TCGCGAAAAT CACCCGCAAG
CAGCGCGGAA CCTTCGACGT CGGCCGTCCG CAGATGTTGC CGGTCGCGGT GGGGGACCGG
CTCCTGATCC GCGGCCGTGA GGACGACCAG GAATTCGCAA ACGGCGACTT CAAGGACGTG
GCGCAGGTCG ACCCCGTCAA GAACGAGATC CTGCTAACCG ACGGAACGAA GCTGCCGGCG
GAGTTTCGGG CGTGGACCTA TGGCCATGCG CTCACGTCTT ATCGATCGCA GGGCAGCACG
GCCGAAGAAT CGCTGCTCGT CCTCGGCGAG GTGGCGGAAC GCGCCCTCAT GCGCCGGCAG
TTCTACGTCG GCAACACCCG CTACCGGGGC GCGCATCGGA TTTACGTCTC GCACCGCGAG
GCGATCTTGA ACCGGCTCGC GCACTCCGAT TCGGGTCGGG AACTGGCGAC GGAATTTATC
CAACGGCACC GGCTCACGCG GGCAGAGCAA ATCGCGATGC GGCCGCTGTG GCGAATGGGC
GACCGCGTGC GGCACATCTG GCGATCGGTC AGAGCGCACG TGGAAGAACT GCGTGAGGCG
ATGCATGAGA GAAGGGAGAT CTGA
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| Protein sequence | MITVGVIRNG ATYLSQHLNK NDYWTEGEKE VQGEWIGHGA TLLGLEGGVQ EKPFEALRRN
RDPRTGKRLT AREDTQRVAF FDVQLSAPKD VSVLAMLGND ERIDAAFREA VKIALEEMER
FAAVRERRGD ARASEAFRLT GNFAGALFFH NTSRDLDPQL HAHAVFANAT WDAERGGWYA
LQPAEMLRAS GYLRQVLYRE LAARLRGLGY EPYDMNANGF SIRGVEHLRE RFSKRTRRVQ
QLADEFAQKK GRRPTNSELR ILVRESRADK LTNVSTAEVR ARQRAELSGE EAQALAGLVT
AARGRAPRRQ WSQGQTLAVL EAALRHVYER SSVVREGEIL NAALDLHPDF YRWRELRQAL
EQHPEAIRRD GEMSLRPIRL EEAATVRRVM EGRNTRFPLG TASHLPERLT RGQLAAARAL
LASKDFVSVL IGDAGTGKTT VLSAIEAAHR QAGGQPFLPL APTTRAREAL VSAGFEHADT
VQRFLVSEVL QAQSARRVVL VDEAGLLSTQ QLDGLTRLAG EQRARLLLVG DTKQHYSVQR
GDALRNVIKH SGVPVVRLSE VLRQRGETDR QFSRMLASGE VMEAFHYAAR RGLIRELGDD
EALFTQAAEH YASNLAQRVE TLVVIPFWDE IERFNVHARA ALRRRGLLGE VEVVREAVKP
VGWSEEQKTH WDQYRIGDRL LFVRDTRFFK RGTAAEVTAI LPDGLQVTGA KGRFAKITRK
QRGTFDVGRP QMLPVAVGDR LLIRGREDDQ EFANGDFKDV AQVDPVKNEI LLTDGTKLPA
EFRAWTYGHA LTSYRSQGST AEESLLVLGE VAERALMRRQ FYVGNTRYRG AHRIYVSHRE
AILNRLAHSD SGRELATEFI QRHRLTRAEQ IAMRPLWRMG DRVRHIWRSV RAHVEELREA
MHERREI
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