| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1189 |
|---|
| Symbol | |
|---|
| ID | 6205447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 1484083 |
|---|
| End bp | 1484859 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641690831 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001818075 |
|---|
| Protein GI | 182413009 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1434] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAATCGTT CCCCCGGTGA GTCATGTGGC GGATTCATTT CCACGCCGGC CCTGATCCTG
CTGCTCATCC TCGGGATCGT CGCAGTCGCC GCGATCCGGC GCTGGGATAT GGTGCTTCCG
CTGGCGGTCG TTTGCGTCGC CGTGTTCATC CTGGTGGGCA ACGGCTTTCT TACCCGGCTG
CTTGCGCGCT CATTGCAGGA GCGAGCGTTC TTCCAAAAGC CGCAAGACTT CGGAGGAGTA
TCAGTGATTG TTCTGCTCGG TGATGGCCAC ATTGTGGAAC GCGGTTCGGG CGAGGCTCTG
CCGGGATGGC TGGCGTATTC TCGCATTGAA CGGGCGTGTG AACTCTACCG TTCTGCGACC
GCGACCGGGG CCGCATGCCG ACTGATCGTA ACTGGAGACG ACATCAGCGA CCTCGGCACT
GCAAAGGAAC CCGTATACGT GCAGCGGCTG CGTGCGCTGG GCGTGCCTGT CGGGGATATC
CGAGTGGAAG GGAAAGGACG GAACACGTAT CGGCAGGCGG AACTGACGAG TGAAATCCTG
AAGAGTGAGC GGTATGATCG CATTTTCATG GTTACGTCAG GGCTGCACAT GAAGCGCGCC
TTGCGCTATT TTCGTAATTT CGGCGTGCGC GCGATTCCCG TGGCGTCCGA TTACGTCATC
GGGAACATCA CGCTTCTCCC GTTGGGTTCA AATCTCGCGA TCGCTGATAT TGCTCTCCAT
CAATACGCGG GGCTGGCGCG GCTTTGGATC TACAATGCTC TGAAATGGAA TAACTGA
|
|---|
| Protein sequence | MNRSPGESCG GFISTPALIL LLILGIVAVA AIRRWDMVLP LAVVCVAVFI LVGNGFLTRL
LARSLQERAF FQKPQDFGGV SVIVLLGDGH IVERGSGEAL PGWLAYSRIE RACELYRSAT
ATGAACRLIV TGDDISDLGT AKEPVYVQRL RALGVPVGDI RVEGKGRNTY RQAELTSEIL
KSERYDRIFM VTSGLHMKRA LRYFRNFGVR AIPVASDYVI GNITLLPLGS NLAIADIALH
QYAGLARLWI YNALKWNN
|
|---|
| |