| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1184 |
|---|
| Symbol | |
|---|
| ID | 6205676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1471858 |
|---|
| End bp | 1473690 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641690826 |
|---|
| Product | adenine-specific DNA methylase |
|---|
| Protein accession | YP_001818070 |
|---|
| Protein GI | 182413004 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1743] Adenine-specific DNA methylase containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTTA TTCTTCATCG CAACTTCAAA TGGAGGGCTC TTTCACGGAA GGTACGGCGG
GAGCAGCGCA ATCGAGAACA TTACTCGCCC ACGATCTCGA CCTACCGCTG GTGGGCCCGC
CGATCGCATG CTTTGATTGG TGCACTGCTC GATCAAAGCC GCAAGGTCTT GGGCCAGGCT
ATCGTCGTCT CGGACCCAAT GGCGGGCGGT GGGACCGTCG CCGTGGAAGC CGCCCGGCGC
GGACTGGTCG TGCACGCACA GGACGTGAAT CCGTGGGCGG CGTTTGGTCT GCGGACCACT
TTGCAGCCGG TCGATCCGGT CCTGCTGGAA CAGGCCGCGA CCCGCCTGAT CGAGCGACTC
GACCGGCTCG GCCGCCAGCT GTACCAAGTC GACGGCCAAG AGGAACTGCT GAGCTGCCTC
CACGTCCGCC ATTGCACCTG CCCGGCTTGT GGCGGCACCA ACTATCTATT TCCGACGCGC
TTGCTTGCGC TCGACCGGCG AATCGTCGCC GAACCGAGCG CCGGTTGGTT CGGTTGCCCG
GCTTGCGGCA CGGTCCAGCA CGACCACTGG CCGGAAGGGC CCGCGCGCTG CAACGTCTGC
CACCACGAAT TCACGGACCG CCCGGACGAA AAACGGATCG AAAACCTTGT CGTAATGTGC
GCCCAGTGCG CGACGAAAAA TCCGCTGACC CCAGAGGCAC TCCAGACCGC CACTTGGAAG
CCGGTGCTGT CGGTAGTGCA AAAGAATCGA AAACTTGAAC TGCACCCGTC GACTGTCGGC
GGCACTCCGT CACGACGCCA AAGCGCGATT GCCGCCAAGC TGGCGAAACG AATCCCGGGC
AAAGGTGAGA CCGCCGCCCT GCAGCGCGGC GGTTTTGTGG AATGGGCAGA GCTGTTCCCC
GACCGTCAGC TCGCAATGCT CGACGAGGCA TTTTCGGCTT TGGATGCAGA AGAGCTATCG
GTGCCCGTGC GCCAGCGCCT GCTTCTGGCC GTCGCCGGGT TCGCCGAGAT GGCGGGATAC
GCCTGTCGCT GGGATCCCAA GTATCGCAAA GTGTACGAGG TGACCTCGAA CCATCACTAC
ACCCGCTCGT TCCTGACTGC GGAAACCAAT CCCGCCGCTG CCATGGGGCG CGGCACGCTG
CCTCGCCGGT TGGCCCAGGC GGTCAAGGCC GCGCAGTGGT TCCCTGGCTC GGACAAAGCC
ACCGTCACCT GCGGGTCGAG TGTAGCGCAA CCTATGGCCG ACGCCTCGGT TGATCTTGTG
ATCACCGACC CGCCGTATTA CGACAGCATC CAGTACGCCG AACTATCGCG CCTATTCCGC
GTCTTCGCCC AAGCCCTCGG CTTGAATTGG GACGATCGGG TCGAAAACGA TGAAGCGGTG
CCGAACCGCC ACCTCGGTTG CTCCCACGAA CAATATGTGA CACGGCTGAC GGCCATCTTT
GCCGAAACCC GTAGGACGCT CAAACGGAGC GGGCGCATGC TTCTCACATT CCACGATTCG
AAGATCCTCG CGTGGCAGGC GATCGGCGAC GCGCTCCGTG ATTCTGCTTG GAAGGTCGTC
AGTGTCGCAG TCGTGCATTC GGAAAACGAA AAAGATTTCG CGAAGAACGA AAAAAACGCG
ATTGCGGTGG ACGCCGTCTT CGAATGTGTG CCGCGGCAGA TCAAGCCCGC GCGAGTGGCC
ACTGCCGGTG CCTTGACCAA TAATTCTGCG AAGAACGTGC TCGCGATTGG AGCGGCTGTT
GCGGCGTATG TGAACGGTTC CGCGCCGCAC CTGAAGCCTC TGTATATGGA TCAAGCCCGC
CGCCGTGGGA TCAAGAAGCT GACGCTAAAT TAA
|
|---|
| Protein sequence | MRLILHRNFK WRALSRKVRR EQRNREHYSP TISTYRWWAR RSHALIGALL DQSRKVLGQA
IVVSDPMAGG GTVAVEAARR GLVVHAQDVN PWAAFGLRTT LQPVDPVLLE QAATRLIERL
DRLGRQLYQV DGQEELLSCL HVRHCTCPAC GGTNYLFPTR LLALDRRIVA EPSAGWFGCP
ACGTVQHDHW PEGPARCNVC HHEFTDRPDE KRIENLVVMC AQCATKNPLT PEALQTATWK
PVLSVVQKNR KLELHPSTVG GTPSRRQSAI AAKLAKRIPG KGETAALQRG GFVEWAELFP
DRQLAMLDEA FSALDAEELS VPVRQRLLLA VAGFAEMAGY ACRWDPKYRK VYEVTSNHHY
TRSFLTAETN PAAAMGRGTL PRRLAQAVKA AQWFPGSDKA TVTCGSSVAQ PMADASVDLV
ITDPPYYDSI QYAELSRLFR VFAQALGLNW DDRVENDEAV PNRHLGCSHE QYVTRLTAIF
AETRRTLKRS GRMLLTFHDS KILAWQAIGD ALRDSAWKVV SVAVVHSENE KDFAKNEKNA
IAVDAVFECV PRQIKPARVA TAGALTNNSA KNVLAIGAAV AAYVNGSAPH LKPLYMDQAR
RRGIKKLTLN
|
|---|
| |