| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1171 |
|---|
| Symbol | |
|---|
| ID | 6206415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1463059 |
|---|
| End bp | 1464036 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641690814 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001818059 |
|---|
| Protein GI | 182412993 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.356223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCA TTCGAGTGCA CGAGACAGGT GGAGCGGATC AGCTGCGCGT TGACGACATT
CCCGCGCCGG AGCCTGCCGC CGGGGAACTT CGTTTCCGCG TCGAAGCGAT CGGGGTGAAT
TTCATCGACA CGTACAAACG CAGCGGGCTC TACCCCGTGC CGTTGCCGCA CACGCTCGGC
CAGGAGGCGG CGGGCGTCGT CACCGCCCTC GGTGCGGGTG TTTCCGGCTT TCGCGTCGGC
GAACGGGTCG GGAGCACGGC CGTGCAAGGC GCGTATGCTG AAGAGGCGAT CGTGCCGGCG
GCGCAGACGG TCAAGGTGCC GGGGCACGTG AGCAGCGAAC TCGCGGCCGC GGTGCTGCTG
CAGGGCATGA CGGCGCATTA TCTCGCATGC GATACCTGGC CGCTCAAGCC GGGGGAATCG
GCCTTGGTGC ATGCAGGCGC CGGCGGTGTC GGGCTGCTGT TGATCCAGAT TGCCAAAATG
CGCGGTGCGC GCGTGCTGGC GACGGTCGGC AGCGACGAAA AGGCGGAGCT GGCCCGCCGC
GCGGGCGCGG ACGCGGTGTG CGTCTACACG CGCGAGGATT TCACCGCCGC GGCGCGCGCG
TTCACGAGCG GTCGCGGCGT CGACGTGGTG TACGACGGCG TGGGCCGGAG CACGTTTGAA
GGCTCGCTTA ACAGCCTGCG ACCGCGCGGA CTGCTGGCGA CTTTTGGCAA TGCCAGCGGC
GCGGTGCCGC CATTCAACCC GCTCCTTCTT TCGCAGAAAG GTTCGCTTTA TCTCACGCGG
CCGACGCTGC AGGCCTACAT CGCGACCCCC GACGAGTTGC GTTCCCGCGC GCAGGATCTG
TTCAGCTGGA TCACGCAGGG CAGACTCCAC GTGCGGATCG GGGCGAAGTT TCCCCTCGCT
GGCGCGGCCG ACGCGCACCG CGCGCTCGAG GGCCGGGCGA CGACGGGCAA GGTGCTGCTG
GAGCCCGCGG CGCGGTGA
|
|---|
| Protein sequence | MRAIRVHETG GADQLRVDDI PAPEPAAGEL RFRVEAIGVN FIDTYKRSGL YPVPLPHTLG
QEAAGVVTAL GAGVSGFRVG ERVGSTAVQG AYAEEAIVPA AQTVKVPGHV SSELAAAVLL
QGMTAHYLAC DTWPLKPGES ALVHAGAGGV GLLLIQIAKM RGARVLATVG SDEKAELARR
AGADAVCVYT REDFTAAARA FTSGRGVDVV YDGVGRSTFE GSLNSLRPRG LLATFGNASG
AVPPFNPLLL SQKGSLYLTR PTLQAYIATP DELRSRAQDL FSWITQGRLH VRIGAKFPLA
GAADAHRALE GRATTGKVLL EPAAR
|
|---|
| |