| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_1036 |
|---|
| Symbol | |
|---|
| ID | 6205833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 1289783 |
|---|
| End bp | 1291132 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641690660 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001817924 |
|---|
| Protein GI | 182412858 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.276879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGA GCTGCACCGA GATCCTGCGG GTCACCCCCT GCGATCCAGA CGGAGCCCAA
CGCGAGTCAC TCGCGAGCCT CCTGGTTAGG ACGGCGCGAG AGAACGACGT CAGTCCTGCT
CAACTCCTCG AATGGAAATT CGCCACGGGC ACTGGACTGC AAATGCTGAA GTTCTCTACC
CGCGCTTTGG GAAGGTCGGT CGGGCAGTCG ATCAATGGAT GCAGCGAGGT CGCCCGAATG
CTGGTCAACC GAACTGAGCA ACTGACCCGC CTGGATGGGC TACGCCGTTC GACCACCTTG
GCGTTCGCTC CGTTCACGAC GTTTAACGGG CTTCTTCGCC AACAGCTCGC TTGGAGTGTG
CAATCCTTGC GCTCCCAAGA AACAAAATAC TATCCGCTCC TCTGGGCGCT GGAGCCGGTG
CGTGTATGTC CAGAAACCAG AAAACCGTTG GGCTCACTTT GCCCGACTTG TCGCCAGTCG
CTGGTTCTCC TTTCTGGCGG CAGTCACATT GGTCGCTGCT ACCGGTGCGG CAGTTCATTG
TTCGAAACGA ACATCGGTGC AGTTCCTGCT GATCCGATTG TTGGTTCTAT ACGCTCGATC
GATTATGAGG TATGGGTAGC GAGAGAGCTG GGCAATTTTA TCAGGTTTCA AACTGTAGAG
TCGTTGTCGG AAGACTTTAG TTATCACCGT GCGCTGGAGC ACTGGTTGGA CTTGTTCGAG
CTCCGCTCAA ACCGGGACGC GGCCAAGGCC TTGGGTGCGT CGCCCCTCGC ATTGTTCAGA
TGGCGTTCGA ACAAAGCCAT TCCACGCCTC CGAATGACGC TGAATCTATG CTGGGTTTTT
GGGATCAGCC TCGTCGATTT TTTGCTGCTT CGGCGTCCAT CCGGCCATGA CGGCAGATTA
CGTCAATCGA TCGACGCAGG GATGCGCCAT GCGGCGGTCT CCACCCGGCG GCGAATCGAT
AAAGCTAGGC TCGGTTCCGA ACTCAGCACG ATTCTGCGGG AGAACAGATA CTCGATGATG
TCGTTCTCAG AAATCTGCAG TCGCAAGCTG CGCCGACGCG ACGTGGTGAT CCGTCAAAAT
TTCCCAGAAG AGGCTCGCCT CGTGGCCCGG CGTTACCTCG AAAACCGAAA GCTTATGGCG
GACATCAAGC GCGACCAGTT TTGCGCAGCC TTGGAAACGG TTGCACGGTT CCTGCACGCC
CGAGGGATTG TTCCTAATTA CAAGACCCTT TCGCCTTACC TCGACCGGCC GAGCAAGTTG
CGATGCGCAT GGGCGATTGC CGCGCTTCGT AGAGTCAGGG AGGAACTCGG CTACGAAGAT
CCGTCGGAGC AATTGATGCT CCTCATTTGA
|
|---|
| Protein sequence | MKSSCTEILR VTPCDPDGAQ RESLASLLVR TARENDVSPA QLLEWKFATG TGLQMLKFST
RALGRSVGQS INGCSEVARM LVNRTEQLTR LDGLRRSTTL AFAPFTTFNG LLRQQLAWSV
QSLRSQETKY YPLLWALEPV RVCPETRKPL GSLCPTCRQS LVLLSGGSHI GRCYRCGSSL
FETNIGAVPA DPIVGSIRSI DYEVWVAREL GNFIRFQTVE SLSEDFSYHR ALEHWLDLFE
LRSNRDAAKA LGASPLALFR WRSNKAIPRL RMTLNLCWVF GISLVDFLLL RRPSGHDGRL
RQSIDAGMRH AAVSTRRRID KARLGSELST ILRENRYSMM SFSEICSRKL RRRDVVIRQN
FPEEARLVAR RYLENRKLMA DIKRDQFCAA LETVARFLHA RGIVPNYKTL SPYLDRPSKL
RCAWAIAALR RVREELGYED PSEQLMLLI
|
|---|
| |